RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 SYVN1Q86TM6 617 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 SPPL2CQ8IUH8 684 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 UBQLNLQ8IYU4 475 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 CHPFQ8IZ52 775 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ANKFN1Q8N957 763 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 OR6F1Q8NGZ6 308 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 HDAC10Q969S8 669 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 OTUB1Q96FW1 271 aaPredicted RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 VAT1Q99536 393 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 CGRRF1Q99675 332 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 GHITMQ9H3K2 345 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 TASP1Q9H6P5 420 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 WDR55Q9H6Y2 383 aaPredicted RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 AGO4Q9HCK5 861 aaKnown RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 HCN3Q9P1Z3 774 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ASH2LQ9UBL3 628 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 CA5BQ9Y2D0 317 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ERBB2P04626 1255 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 GPIP06744 558 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 SNRPB2P08579 225 aaKnown RBP11.66□□□□□ -0.54
NPHP4-202ENST00000378161 CD63P08962 238 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 FNTBP49356 437 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 NOMO2Q5JPE7 1267 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ANKRD54Q6NXT1 300 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 MFSD7Q6UXD7 560 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 HIPK1Q86Z02 1210 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 ATPAF2Q8N5M1 289 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 UFD1Q92890 307 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 PDGFCQ9NRA1 345 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 TAS2R7Q9NYW3 318 aa11.66□□□□□ -0.54
NPHP4-202ENST00000378161 CLUHO75153 1309 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 OR5K3A6NET4 321 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 OR5K4A6NMS3 321 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 NT5C1B-RDH14C9J2C7 533 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 NR5A2O00482 541 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 SOCS2O14508 198 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 GNAO1P09471 354 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 IL7RP16871 459 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 CRHR1P34998 444 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 CDH13P55290 713 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 BAMBIQ13145 260 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 CEACAM7Q14002 265 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 SMAD1Q15797 465 aaKnown RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF792Q3KQV3 632 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 BCL7AQ4VC05 210 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 CCNJQ5T5M9 372 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 APOBEC3HQ6NTF7 200 aaKnown RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ARMC6Q6NXE6 501 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 MAP4K3Q8IVH8 894 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 SULF1Q8IWU6 871 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF276Q8N554 614 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 SETD6Q8TBK2 473 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF606Q8WXB4 792 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 SLC7A6Q92536 515 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 MMP19Q99542 508 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 KCNS3Q9BQ31 491 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 GPR63Q9BZJ6 419 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 PIM2Q9P1W9 311 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ZNRF3Q9ULT6 936 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 PCDHAC2Q9Y5I4 1007 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 TCRBV9S1A1TA0A576 114 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 G3V2T6 193 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 UGT2B11O75310 529 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ETS1P14921 441 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 MTHFRP42898 656 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 NCS1P62166 190 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 GRK1Q15835 563 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 LILRA2Q8N149 483 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 OR5J2Q8NH18 312 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 NDNFQ8TB73 568 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 MARC2Q969Z3 335 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 CCDC126Q96EE4 140 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF668Q96K58 619 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 PRMT6Q96LA8 375 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 CHCHD6Q9BRQ6 235 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 FEM1AQ9BSK4 669 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ENTPD4Q9Y227 616 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 TCAF1Q9Y4C2 921 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 MYO1GB0I1T2 1018 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 F5H423 210 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 OGTO15294 1046 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ULK1O75385 1050 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 IL18RAPO95256 599 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 RPLP0P05388 317 aaKnown RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 BMP1P13497 986 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 CBLP22681 906 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 VAMP1P23763 118 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 SPRP35270 261 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-202ENST00000378161 RBP5P82980 135 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 FMO1Q01740 532 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 PIK3R6Q5UE93 754 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 FCRLBQ6BAA4 426 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 GLYATQ6IB77 296 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 RAB11FIP2Q7L804 512 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 GLRX5Q86SX6 157 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF527Q8NB42 609 aa11.65□□□□□ -0.54
NPHP4-202ENST00000378161 AP2M1Q96CW1 435 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms