RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 LSMEM1Q8N8F7 131 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 C1orf131Q8NDD1 294 aaKnown RBP2.08□□□□□ -2.08
VPS13A-206ENST00000376646 RBM15BQ8NDT2 890 aaKnown RBP2.08□□□□□ -2.08
VPS13A-206ENST00000376646 MAGEC3Q8TD91 643 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 FCAMRQ8WWV6 532 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 APBB2Q92870 758 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 JAKMIP2Q96AA8 810 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 SAT2Q96F10 170 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-206ENST00000376646 SERINC2Q96SA4 455 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 SH3GL2Q99962 352 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 NCAPGQ9BPX3 1015 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 TMEM47Q9BQJ4 181 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 MOV10L1Q9BXT6 1211 aaKnown RBP2.08□□□□□ -2.08
VPS13A-206ENST00000376646 PLK3Q9H4B4 646 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 TFB2MQ9H5Q4 396 aaKnown RBP2.08□□□□□ -2.08
VPS13A-206ENST00000376646 SLC52A3Q9NQ40 469 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 NKIRAS2Q9NYR9 191 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 SUCLA2Q9P2R7 463 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-206ENST00000376646 SNX8Q9Y5X2 465 aa2.08□□□□□ -2.08
VPS13A-206ENST00000376646 SYNDIG1LA6NDD5 238 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 C5orf60A6NFR6 353 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 A8MV72 311 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 H3BQ06 376 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 CTDSP2O14595 271 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 TCERG1O14776 1098 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SCAMP1O15126 338 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 EIF3DO15371 548 aaKnown RBP eCLIP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 ERAL1O75616 437 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 CAMPP49913 170 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 MRPL12P52815 198 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 MFAP4P55083 255 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 LRMPQ12912 555 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 USP41Q3LFD5 358 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 CDONQ4KMG0 1287 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 TMEM35AQ53FP2 167 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 PLEKHS1Q5SXH7 462 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 LRIF1Q5T3J3 769 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SLC35E4Q6ICL7 350 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 JADE1Q6IE81 842 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 ATG9AQ7Z3C6 839 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 NOTCH2NLQ7Z3S9 236 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 MYPOPQ86VE0 399 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 MAP7D3Q8IWC1 876 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 POC5Q8NA72 575 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 HJURPQ8NCD3 748 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 ZNF248Q8NDW4 579 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 DBF4BQ8NFT6 615 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 IGSF8Q969P0 613 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 QRFPRQ96P65 431 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SLF1Q9BQI6 1058 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 PDE7BQ9NP56 450 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 OGFRQ9NZT2 677 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 MAU2Q9Y6X3 613 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 IGLV5-45A0A087WSX0 123 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 ZCWPW2A0A1B0GU75 182 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SPINT2O43291 252 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 HCRTR2O43614 444 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 EXTL3O43909 919 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 HS6ST1O60243 411 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 PLOD3O60568 738 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 ENTPD3O75355 529 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 TPPPO94811 219 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 IGHV4-39P01824 125 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 FAM106CPP0CH98 169 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 PAX1P15863 534 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 DDX5P17844 614 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 APOBEC1P41238 236 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 AIMP2Q13155 320 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 BMP2KLQ5H9B9 411 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 C18orf63Q68DL7 685 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SIGIRRQ6IA17 410 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SEPT14Q6ZU15 432 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 DPPA4Q7L190 304 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 GPR180Q86V85 440 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SCML4Q8N228 414 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 STPG4Q8N801 248 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SNRNP27Q8WVK2 155 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SGCDQ92629 289 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 LGALS12Q96DT0 336 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 STAMBPL1Q96FJ0 436 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SENP5Q96HI0 755 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 PGAM5Q96HS1 289 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 OR2A14Q96R47 310 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 ACOX2Q99424 681 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 PCGF1Q9BSM1 259 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 BARHL1Q9BZE3 327 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 FAM118AQ9NWS6 357 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 MARCH4Q9P2E8 410 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 ZNF624Q9P2J8 865 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 FBXL2Q9UKC9 423 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 PTRH2Q9Y3E5 179 aaKnown RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 KIAA1210Q9ULL0 1709 aa2.07□□□□□ -2.08
VPS13A-206ENST00000376646 TP53BP1Q12888 1972 aaPredicted RBP2.07□□□□□ -2.08
VPS13A-206ENST00000376646 SMIM1B2RUZ4 78 aa2.06□□□□□ -2.08
VPS13A-206ENST00000376646 TMEM178BH3BS89 294 aa2.06□□□□□ -2.08
VPS13A-206ENST00000376646 SYNCRIPO60506 623 aaKnown RBP2.06□□□□□ -2.08
VPS13A-206ENST00000376646 CTSVO60911 334 aa2.06□□□□□ -2.08
VPS13A-206ENST00000376646 CRLF1O75462 422 aa2.06□□□□□ -2.08
VPS13A-206ENST00000376646 JRKO75564 520 aa2.06□□□□□ -2.08
VPS13A-206ENST00000376646 DNTTP04053 509 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms