RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 HLA-DQB2P05538 268 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 SLC2A4P14672 509 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-205ENST00000376492 RWDD2BP57060 319 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 DYNLT1P63172 113 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 AP1B1Q10567 949 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 CHAF1BQ13112 559 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 PLA2G4EQ3MJ16 856 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 PRR30Q53SZ7 412 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-205ENST00000376492 HENMT1Q5T8I9 393 aaKnown RBP12.91□□□□□ -0.34
CLCN6-205ENST00000376492 KAZNQ674X7 775 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 BBS12Q6ZW61 710 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 NDUFAF2Q8N183 169 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 CNTD1Q8N815 330 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 RSC1A1Q92681 617 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 ALS2CR12Q96Q35 445 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
CLCN6-205ENST00000376492 ACTL8Q9H568 366 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 ZNF768Q9H5H4 540 aaKnown RBP12.91□□□□□ -0.34
CLCN6-205ENST00000376492 ATXN10Q9UBB4 475 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 SAE1Q9UBE0 346 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-205ENST00000376492 KCND3Q9UK17 655 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 AMFRQ9UKV5 643 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 TTLL3Q9Y4R7 772 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 PCDHGA6Q9Y5G7 932 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 RP1L1Q8IWN7 2480 aaPredicted RBP12.91□□□□□ -0.34
CLCN6-205ENST00000376492 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 OR5K4A6NMS3 321 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 NUAK1O60285 661 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 SPAG6O75602 509 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 PRLP01236 227 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 PTPN7P35236 360 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 SPINT3P49223 89 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 PPP1CAP62136 330 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 RPS18P62269 152 aaKnown RBP12.9□□□□□ -0.34
CLCN6-205ENST00000376492 NIPAL4Q0D2K0 466 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 ZBTB17Q13105 803 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 SEMA5AQ13591 1074 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 IL11RAQ14626 422 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 PRKD1Q15139 912 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-205ENST00000376492 LLGL1Q15334 1064 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 SEPT7Q16181 437 aaKnown RBP12.9□□□□□ -0.34
CLCN6-205ENST00000376492 ZNF787Q6DD87 383 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 CRTC3Q6UUV7 619 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 FAM92BQ6ZTR7 304 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 TMEM26Q6ZUK4 368 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 PEX26Q7Z412 305 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 CCDC50Q8IVM0 306 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 APLFQ8IW19 511 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-205ENST00000376492 ALG3Q92685 438 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 P3H4Q92791 437 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 OR2AG1Q9H205 316 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 RMI1Q9H9A7 625 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 AKIRIN1Q9H9L7 192 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-205ENST00000376492 LHX9Q9NQ69 397 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 KLC4Q9NSK0 619 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 TRMT1Q9NXH9 659 aaKnown RBP12.9□□□□□ -0.34
CLCN6-205ENST00000376492 ZNF624Q9P2J8 865 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-205ENST00000376492 SLC23A2Q9UGH3 650 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 MAP4K5Q9Y4K4 846 aa12.9□□□□□ -0.34
CLCN6-205ENST00000376492 USP27XA6NNY8 438 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 MIF4GDA9UHW6 222 aaKnown RBP12.89□□□□□ -0.35
CLCN6-205ENST00000376492 APOC4-APOC2K7ER74 178 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 SORBS2O94875 1100 aaKnown RBP12.89□□□□□ -0.35
CLCN6-205ENST00000376492 VIPP01282 170 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 APOC2P02655 101 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 MMP2P08253 660 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 CCNYL3P0C7X3 344 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 PYGMP11217 842 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 FGF5P12034 268 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 PECAM1P16284 738 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-205ENST00000376492 AMD1P17707 334 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 COL8A1P27658 744 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 SLC19A1P41440 591 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 CAPZBP47756 277 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 PGDP52209 483 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 XRCC4Q13426 336 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 ALS2CLQ60I27 953 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 TRIM48Q8IWZ4 208 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 AVL9Q8NBF6 648 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 KIF18AQ8NI77 898 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 TFB1MQ8WVM0 346 aaKnown RBP12.89□□□□□ -0.35
CLCN6-205ENST00000376492 HEMGNQ9BXL5 484 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 OSBPL8Q9BZF1 889 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 CARD9Q9H257 536 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 FAM83DQ9H4H8 585 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 UCK1Q9HA47 277 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 LUZP4Q9P127 313 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 DNPEPQ9ULA0 475 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 PADI1Q9ULC6 663 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 DNAJC16Q9Y2G8 782 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 JRKLQ9Y4A0 524 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 CENPEQ02224 2701 aa12.89□□□□□ -0.35
CLCN6-205ENST00000376492 OR52A4PA6NMU1 304 aa12.88□□□□□ -0.35
CLCN6-205ENST00000376492 PDZK1P1A8MUH7 402 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms