RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 PDE10AQ9Y233 779 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 ENPP3O14638 875 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 XPNPEP2O43895 674 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 CYBBP04839 570 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 PCMT1P22061 227 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 OCA2Q04671 838 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 FAPQ12884 760 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 SEMA3AQ14563 771 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 GRIK4Q16099 956 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 KIAA0408Q6ZU52 694 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 TRPM4Q8TD43 1214 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 PCED1BQ96HM7 432 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 PSD2Q9BQI7 771 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 MPP6Q9NZW5 540 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 NCF1BA6NI72 391 aaPredicted RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 NCF1CA8MVU1 366 aaPredicted RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 A8MX80 341 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 RTCAO00442 366 aaKnown RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 MATN3O15232 486 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 NCF1P14598 390 aaPredicted RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 WARSP23381 471 aaKnown RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 PGFP49763 221 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 AGTR2P50052 363 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 TPD52P55327 224 aaPredicted RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 TPTEP56180 551 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 VBP1P61758 197 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 CCNA1P78396 465 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 FOXM1Q08050 763 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 CATSPEREQ5SY80 951 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 DEPDC1Q5TB30 811 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 UGT3A1Q6NUS8 523 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 TFAP2DQ7Z6R9 452 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 TMEM199Q8N511 208 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 FRS2Q8WU20 508 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 EMID1Q96A84 441 aaPredicted RBP11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 TSPAN17Q96FV3 270 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 NSMCE2Q96MF7 247 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 KLHL5Q96PQ7 755 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 ZNF225Q9UK10 706 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 NUDT5Q9UKK9 219 aa11.38□□□□□ -0.59
TM9SF2-201ENST00000376387 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 A6NL46 340 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 EEDO75530 441 aaKnown RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 UMPSP11172 480 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 MAP2K4P45985 399 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 POLR2JP52435 117 aaKnown RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 NFKB2Q00653 900 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 ARTNQ5T4W7 220 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 AGAP7PQ5VUJ5 663 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 KDELC1Q6UW63 502 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 PRR23BQ6ZRT6 265 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 ARMCX2Q7L311 632 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 TMEM179BQ7Z7N9 219 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 SLC22A16Q86VW1 577 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 JAZF1Q86VZ6 243 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 CNIH3Q8TBE1 160 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 TMEM40Q8WWA1 233 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 ZNF560Q96MR9 790 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 HBEGFQ99075 208 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 CEP44Q9C0F1 390 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 SMOC2Q9H3U7 446 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 EPS8L2Q9H6S3 715 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 AIG1Q9NVV5 245 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 DNAJC25-GNG10A0A024R161 153 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 FAM25EA8MYX2 175 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 H3BRB1 525 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 MSI1O43347 362 aaKnown RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 SLC22A3O75751 556 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 CDH1P12830 882 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 TCEA1P23193 301 aaKnown RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 CD86P42081 329 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 TAF2Q6P1X5 1199 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 TXNDC11Q6PKC3 985 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 C16orf54Q6UWD8 224 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 KRT77Q7Z794 578 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 CHPFQ8IZ52 775 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 LGI2Q8N0V4 545 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 SCML4Q8N228 414 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 FBXO30Q8TB52 745 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 HDAC2Q92769 488 aaKnown RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 PGAP3Q96FM1 320 aaPredicted RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 ZFP42Q96MM3 310 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 RHNO1Q9BSD3 238 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 SLCO3A1Q9UIG8 710 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 HHLA1C9JL84 531 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 G3V2T6 193 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 MGEA5O60502 916 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 USP2O75604 605 aaPredicted RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 NADKO95544 446 aaPredicted RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 CD4P01730 458 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 HTR1EP28566 365 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 EEFSECP57772 596 aaKnown RBP11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 EMX2Q04743 252 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 ITKQ08881 620 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 SLC13A2Q13183 592 aa11.37□□□□□ -0.59
TM9SF2-201ENST00000376387 KCNAB2Q13303 367 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms