RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LEPRP48357 1165 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 FAM110CQ1W6H9 321 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 RGS21Q2M5E4 152 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 SPANXN4Q5MJ08 99 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 PM20D1Q6GTS8 502 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 NECAB2Q7Z6G3 386 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 SLCO6A1Q86UG4 719 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 NKAPQ8N5F7 415 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 ZNF540Q8NDQ6 660 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 ROPN1LQ96C74 230 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 CEP19Q96LK0 163 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 ITM2CQ9NQX7 267 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 MAP10Q9P2G4 905 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 SNX8Q9Y5X2 465 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 COL6A1P12109 1028 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 OR1D2P34982 312 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 SCAPQ12770 1279 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 SYT16Q17RD7 645 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 ZBED5Q49AG3 693 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 MSANTD2Q6P1R3 559 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 R3HCC1LQ7Z5L2 792 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 CACUL1Q86Y37 369 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 CHERPQ8IWX8 916 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 PIANPQ8IYJ0 282 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 KRTCAP2Q8N6L1 136 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 IMP4Q96G21 291 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 GLT1D1Q96MS3 346 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 RANBP9Q96S59 729 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 MFSD1Q9H3U5 465 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 PRDM8Q9NQV8 689 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 SCN3BQ9NY72 215 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 ACTR3BQ9P1U1 418 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 CD84Q9UIB8 345 aa14.21□□□□□ -0.13
TNFRSF1B-201ENST00000376259 ZSCAN9O15535 394 aaPredicted RBP14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MGEA5O60502 916 aa14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CHRM5P08912 532 aaPredicted RBP14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FPGSQ05932 587 aa14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CBX3Q13185 183 aa14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CRY1Q16526 586 aa14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CYP20A1Q6UW02 462 aa14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 LIX1Q8N485 282 aa14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SLC47A1Q96FL8 570 aa14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RPF2Q9H7B2 306 aaKnown RBP14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CCM2LQ9NUG4 571 aaPredicted RBP14.21□□□□□ -0.14
TNFRSF1B-201ENST00000376259 A0A1W2PP18 115 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TBKBP1A7MCY6 615 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MUSKO15146 869 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RECQL5O94762 991 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MLYCDO95822 493 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CHRNA1P02708 482 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRPC1P48995 793 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KPNA1P52294 538 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ZNF135P52742 658 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRAP1Q12931 704 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 DNASE1L3Q13609 305 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 C6orf136Q5SQH8 315 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 AFTPHQ6ULP2 937 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ALKAL1Q6UXT8 129 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 LARP4Q71RC2 724 aaKnown RBP eCLIP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 OR4F6Q8NGB9 312 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PTCD2Q8WV60 388 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SLCO4A1Q96BD0 722 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 AARSD1Q9BTE6 412 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SPASTQ9UBP0 616 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PHIPQ8WWQ0 1821 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KRT87PA6NCN2 255 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SOAT1P35610 550 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRIM32Q13049 653 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRIP4Q15650 581 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MAMDC4Q6UXC1 1216 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 EFL1Q7Z2Z2 1120 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 THAP5Q7Z6K1 395 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KIAA2013Q8IYS2 634 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GTF3C2Q8WUA4 911 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 NT5C3BQ969T7 300 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 UGT2B28Q9BY64 529 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRIM54Q9BYV2 358 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TOR3AQ9H497 397 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 COQ6Q9Y2Z9 468 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 NRXN2Q9P2S2 1712 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GNG14A0A1W2PPG7 69 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 POU2F1P14859 743 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ITGALP20701 1170 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GPX3P22352 226 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MZF1P28698 734 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RGRP47804 291 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PURAQ00577 322 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CCDC85BQ15834 202 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 KCNA10Q16322 511 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 UAP1L1Q3KQV9 507 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 LINC01465Q8N7H1 131 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 HPS1Q92902 700 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FEM1CQ96JP0 617 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SLC30A3Q99726 388 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SMOC2Q9H3U7 446 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RRAGCQ9HB90 399 aa14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FARSBQ9NSD9 589 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-201ENST00000376259 BBIP1A8MTZ0 92 aa14.19□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TBL1XO60907 577 aa14.19□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FLT3LGP49771 235 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms