RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 Q96MT0 163 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 CCDC177Q9NQR7 707 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 POLR1DQ9Y2S0 133 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 NUP188Q5SRE5 1749 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 PRKCGP05129 697 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 CYP4B1P13584 511 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 HOXB6P17509 224 aaKnown RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ALOX12P18054 663 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 BMP7P18075 431 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 UGT2B15P54855 530 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ITGA1P56199 1179 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 STX4Q12846 297 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 DPYSQ14117 519 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 MED27Q6P2C8 311 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 C15orf39Q6ZRI6 1047 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 PHC3Q8NDX5 983 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 XAGE5Q8WWM1 108 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 HMG20AQ9NP66 347 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 SLC2A6Q9UGQ3 507 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 GNEQ9Y223 722 aaKnown RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 PIPSLA2A3N6 862 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 FAM149AA5PLN7 773 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 FPGTO14772 594 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 SIX3O95343 332 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 GPR33Q49SQ1 333 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ERICH5Q6P6B1 374 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 TMC5Q6UXY8 1006 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 KBTBD2Q8IY47 623 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 C7orf61Q8IZ16 206 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 MYDGFQ969H8 173 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ZNF317Q96PQ6 595 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 TMEM175Q9BSA9 504 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 POMPQ9Y244 141 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 EME2A4GXA9 379 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 C8GP07360 202 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 MTAPQ13126 283 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 DCTN2Q13561 401 aaKnown RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 SLC9B1Q4ZJI4 515 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 CEP78Q5JTW2 689 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 TRIQKQ629K1 86 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ANKRD46Q86W74 232 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 WDTC1Q8N5D0 677 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 SLC38A2Q96QD8 506 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 C11orf84Q9BUA3 381 aaPredicted RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 GEMIN8Q9NWZ8 242 aaKnown RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 GSTK1Q9Y2Q3 226 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 KAT6AQ92794 2004 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ITM2AO43736 263 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 CAPN15O75808 1086 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 PCCBP05166 539 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 PRPS2P11908 318 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 IMPDH1P20839 514 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 CARD16Q5EG05 197 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 RAD51AP1Q96B01 352 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 ERGIC3Q9Y282 383 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 SH3GLB1Q9Y371 365 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 MTMR11A4FU01 709 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 ALPIP09923 528 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 SOX4Q06945 474 aaPredicted RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 KLF1Q13351 362 aaPredicted RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 SWT1Q5T5J6 900 aaKnown RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 GALNT13Q8IUC8 556 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 AMER2Q8N7J2 671 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 POMGNT2Q8NAT1 580 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 ZNF461Q8TAF7 563 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 REXO4Q9GZR2 422 aaKnown RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 MUC13Q9H3R2 512 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 ZNF395Q9H8N7 513 aaPredicted RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 C1orf109Q9NX04 203 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 CNOT6Q9ULM6 557 aaKnown RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 GABRQQ9UN88 632 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
C9orf47-203ENST00000375851 MYH10P35580 1976 aa13.46□□□□□ -0.25
C9orf47-203ENST00000375851 IGKV6-21A0A0C4DH24 114 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 FANCGO15287 622 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 OR6B1O95007 311 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 CCNYL3P0C7X3 344 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 GNAZP19086 355 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 MTHFRP42898 656 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 MS4A13Q5J8X5 152 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 SAPCD2Q86UD0 394 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 ROPN1LQ96C74 230 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 TSC22D4Q9Y3Q8 395 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 ABHD14A-ACY1A0A1B0GW23 586 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 KPNA4O00629 521 aaPredicted RBP13.46□□□□□ -0.26
C9orf47-203ENST00000375851 MGRN1O60291 552 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 CNTN5O94779 1100 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 FYNP06241 537 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 CCR3P51677 355 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 ERVK-21P61565 698 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 HERVK_113P63132 956 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 GPR107Q5VW38 600 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 LYSMD3Q7Z3D4 306 aa13.46□□□□□ -0.26
C9orf47-203ENST00000375851 LIX1Q8N485 282 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms