RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ADPRMQ3LIE5 342 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 LRIT3Q3SXY7 679 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 FUT11Q495W5 492 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 C6orf141Q5SZD1 244 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 ARMC8Q8IUR7 673 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 CNTN4Q8IWV2 1026 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 C8orf59Q8N0T1 100 aaPredicted RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 OR6Q1Q8NGQ2 317 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 SPATA17Q96L03 361 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 UBXN10Q96LJ8 280 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 ARPC5LQ9BPX5 153 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 PIF1Q9H611 641 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 FBXO8Q9NRD0 319 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 SLC2A6Q9UGQ3 507 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 NUAK1O60285 661 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 ALPLP05186 524 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 CES1P23141 567 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 SLC11A1P49279 550 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 POU6F1Q14863 301 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 PTRH1Q86Y79 214 aaKnown RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 MIER2Q8N344 545 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 HTRA1Q92743 480 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 TMEM74Q96NL1 305 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 BDH2Q9BUT1 245 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 TOR3AQ9H497 397 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 MRM3Q9HC36 420 aaKnown RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 SLC52A3Q9NQ40 469 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
MSH5-204ENST00000375755 PDE10AQ9Y233 779 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 PCDHB7Q9Y5E2 793 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 SPO11Q9Y5K1 396 aa12.78□□□□□ -0.36
MSH5-204ENST00000375755 OAS3Q9Y6K5 1087 aaKnown RBP12.78□□□□□ -0.36
MSH5-204ENST00000375755 C16orf96A6NNT2 1141 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 CHEK2O96017 543 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 TYMPP19971 482 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 HRH2P25021 359 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 SERPINB1P30740 379 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 KPNA2P52292 529 aaKnown RBP12.77□□□□□ -0.36
MSH5-204ENST00000375755 FPGSQ05932 587 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 RTP2Q5QGT7 225 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 CATSPEREQ5SY80 951 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 ARTNQ5T4W7 220 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 LAIR2Q6ISS4 152 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 STK32CQ86UX6 486 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 CLEC4FQ8N1N0 589 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 OR7A2PQ8NGA2 310 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 TMBIM1Q969X1 311 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 ZNF419Q96HQ0 510 aaPredicted RBP12.77□□□□□ -0.36
MSH5-204ENST00000375755 PARVBQ9HBI1 364 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 NEU3Q9UQ49 428 aa12.77□□□□□ -0.36
MSH5-204ENST00000375755 H3BMM5 538 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 NDUFS2O75306 463 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 SUPT7LO94864 414 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 VNN2O95498 520 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 UMPSP11172 480 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 PCMT1P22061 227 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CYP2C18P33260 490 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 POLD2P49005 469 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 SLC12A2P55011 1212 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CTXN3Q4LDR2 81 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 PRSS55Q6UWB4 352 aaPredicted RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 RNF19BQ6ZMZ0 732 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.77□□□□□ -0.378e-8■□□□□ 10.5
MSH5-204ENST00000375755 USP43Q70EL4 1123 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 OTOP3Q7RTS5 596 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 PNPLA1Q8N8W4 532 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 PIK3C3Q8NEB9 887 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 LILRB4Q8NHJ6 448 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 NTAN1Q96AB6 310 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 VPS33AQ96AX1 596 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CCDC126Q96EE4 140 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 PGAP3Q96FM1 320 aaPredicted RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 TXNDC15Q96J42 360 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 BTBD2Q9BX70 525 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 PAK1IP1Q9NWT1 392 aaPredicted RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 TMEM161AQ9NX61 479 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 DNAJC15Q9Y5T4 150 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 M0R3G1 203 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 PPP6CO00743 305 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 GUCY1B2O75343 617 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 GABARAPO95166 117 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 OAZ2O95190 189 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CPB1P15086 417 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 ITIH1P19827 911 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CD40LGP29965 261 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 KCNC1P48547 511 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CDH13P55290 713 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 GALNT1Q10472 559 aaPredicted RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 SCAPQ12770 1279 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms