RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 NKX2-8O15522 239 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 SLC28A2O43868 658 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 KIF1CO43896 1103 aaKnown RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 RASSF9O75901 435 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 RBP3P10745 1247 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 SFTPCP11686 197 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 LPOP22079 712 aaPredicted RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 CTNNA2P26232 953 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 HALP42357 657 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 EIF3EP60228 445 aaKnown RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 SH3BP2P78314 561 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 DMPKQ09013 629 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 OLIG2Q13516 323 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 ANKRD20A2Q5SQ80 823 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 ANKRD20A1Q5TYW2 823 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 ANKRD20A3Q5VUR7 823 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 ITPRIPL1Q6GPH6 555 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 RANBP10Q6VN20 620 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 OR4K2Q8NGD2 314 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 RSC1A1Q92681 617 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 KIAA1143Q96AT1 154 aaPredicted RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 ZDHHC12Q96GR4 267 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 MRFAP1L1Q96HT8 127 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 SLC45A3Q96JT2 553 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 FAM118BQ9BPY3 351 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 APOL2Q9BQE5 337 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 FAM117AQ9C073 453 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 GPN2Q9H9Y4 310 aaPredicted RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 STARD5Q9NSY2 213 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 SIDT1Q9NXL6 827 aaKnown RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 PSMD13Q9UNM6 376 aa13.96□□□□□ -0.18
NELFE-201ENST00000375425 AAR2Q9Y312 384 aaKnown RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 REXO2Q9Y3B8 237 aaKnown RBP13.96□□□□□ -0.18
NELFE-201ENST00000375425 CCDC66A2RUB6 948 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 C5orf60A6NFR6 353 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 ZNF891A8MT65 544 aaPredicted RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 KCNN4O15554 427 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 PJA2O43164 708 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 IPO7O95373 1038 aaKnown RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 PRAMEF1O95521 474 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 MSH3P20585 1137 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 FECHP22830 423 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 PSMB4P28070 264 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 ADRA1AP35348 466 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 CAPZBP47756 277 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 RWDD2BP57060 319 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 ABHD18Q0P651 414 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 NFE2L1Q14494 772 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 PRPSAP1Q14558 356 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 TAF1AQ15573 450 aaPredicted RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 RPE65Q16518 533 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 LONRF2Q1L5Z9 754 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 FNBP1LQ5T0N5 605 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 CACHD1Q5VU97 1274 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 AADACL2Q6P093 401 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 BORAQ6PGQ7 559 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 DARS2Q6PI48 645 aaKnown RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 RAD9BQ6WBX8 426 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 FAM83HQ6ZRV2 1179 aaPredicted RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 FAM92BQ6ZTR7 304 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 DET1Q7L5Y6 550 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 PRICKLE2Q7Z3G6 844 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 CDKL3Q8IVW4 592 aaPredicted RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 BEND7Q8N7W2 519 aaPredicted RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 OR6C1Q96RD1 312 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 EFHD1Q9BUP0 239 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 RBSNQ9H1K0 784 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 TRIT1Q9H3H1 467 aaKnown RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 ZNF768Q9H5H4 540 aaKnown RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 GEMIN8Q9NWZ8 242 aaKnown RBP13.95□□□□□ -0.18
NELFE-201ENST00000375425 KCTD3Q9Y597 815 aa13.95□□□□□ -0.18
NELFE-201ENST00000375425 BTNL10A8MVZ5 291 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 PYCARD-AS1I3L0S3 204 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 TJP3O95049 919 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 DLGAP3O95886 979 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 PYGMP11217 842 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 AKT1P31749 480 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 PTPN7P35236 360 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 CETN2P41208 172 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 NFKB2Q00653 900 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 MSLNQ13421 630 aaPredicted RBP13.94□□□□□ -0.18
NELFE-201ENST00000375425 METRNLQ641Q3 311 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 IRGCQ6NXR0 463 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 CCDC110Q8TBZ0 833 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 NAT14Q8WUY8 206 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 KLHL6Q8WZ60 621 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 ALG3Q92685 438 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 RNF31Q96EP0 1072 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 ZNF514Q96K75 400 aaPredicted RBP13.94□□□□□ -0.18
NELFE-201ENST00000375425 ULBP3Q9BZM4 244 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 RAB33BQ9H082 229 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 SLC25A18Q9H1K4 315 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 ASB8Q9H765 288 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 SMOXQ9NWM0 555 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 EPHA6Q9UF33 1036 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 IL17BQ9UHF5 180 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 FKBPLQ9UIM3 349 aa13.94□□□□□ -0.18
NELFE-201ENST00000375425 HEMK1Q9Y5R4 338 aaPredicted RBP13.94□□□□□ -0.18
NELFE-201ENST00000375425 SPENQ96T58 3664 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms