RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 UMODL1-AS1Q8N2C9 162 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 EEF1AKMT1Q8WVE0 214 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 SCAMP4Q969E2 229 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 TSGA13Q96PP4 275 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 OXSMQ9NWU1 459 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 MTRRQ9UBK8 725 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 A0A088AWK7 358 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 M0QZQ0 153 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 NUDT14O95848 222 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 NELFEP18615 380 aaKnown RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 ZNF10P21506 573 aaPredicted RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 RFC2P35250 354 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 KIR3DL1P43629 444 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 POLR2JP52435 117 aaKnown RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 DPYSQ14117 519 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 FBXO46Q6PJ61 603 aaPredicted RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 HID1Q8IV36 788 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 USP7Q93009 1102 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 PPCDCQ96CD2 204 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 ZNF317Q96PQ6 595 aaPredicted RBP17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 GPR22Q99680 433 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 FNIP2Q9P278 1114 aa17.75■□□□□ 0.43
PTPDC1-202ENST00000375360 EME2A4GXA9 379 aaPredicted RBP17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 CDHR3Q6ZTQ4 885 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 IRF7Q92985 503 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 RMND5BQ96G75 393 aaPredicted RBP17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 OR52B2Q96RD2 323 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 TRMT61BQ9BVS5 477 aaKnown RBP17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 KIFC1Q9BW19 673 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 FAIM2Q9BWQ8 316 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 RPS6KB2Q9UBS0 482 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 ACTL7AQ9Y615 435 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 MMP20O60882 483 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 TIPRLO75663 272 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 NR2F1P10589 423 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 UROSP10746 265 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 RING1Q06587 406 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 C22orf39Q6P5X5 142 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 OR2T12Q8NG77 320 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 PSKH2Q96QS6 385 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 B4GALT6Q9UBX8 382 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 CDV3Q9UKY7 258 aaKnown RBP17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 CCR10P46092 362 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 MANFP55145 182 aaKnown RBP17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 CPTPQ5TA50 214 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 LPCAT4Q643R3 524 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 SPPL2CQ8IUH8 684 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 SEC14L1Q92503 715 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 MCMBPQ9BTE3 642 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 OSER1Q9NX31 292 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 DNAJC28Q9NX36 388 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 LAMA4Q16363 1823 aa17.74■□□□□ 0.43
PTPDC1-202ENST00000375360 ECI2O75521 394 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 VIPP01282 170 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 KRT20P35900 424 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 CHSY3Q70JA7 882 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 CILP2Q8IUL8 1156 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 CCDC28BQ9BUN5 200 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 ANXA4P09525 319 aaPredicted RBP17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 UBXN2BQ14CS0 331 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 GPR33Q49SQ1 333 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 DPY19L3Q6ZPD9 716 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 BTN2A2Q8WVV5 523 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 C10orf82Q8WW14 230 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 LPGAT1Q92604 370 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 MRGPRX2Q96LB1 330 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 PRPF19Q9UMS4 504 aaKnown RBP17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 A0A0G2JN53 185 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 TM7SF2O76062 418 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 CYP11A1P05108 521 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 ACP5P13686 325 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 PSMB9P28065 219 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 SERPINB10P48595 397 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 HLA-DQA1Q5Y7H0 255 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 SULT1C3Q6IMI6 304 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 TPRG1Q6ZUI0 275 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 HMGB4Q8WW32 186 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 RERGQ96A58 199 aaPredicted RBP17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 AIF1LQ9BQI0 150 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 PRKAB1Q9Y478 270 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 TGM5O43548 720 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 C2orf80Q0P641 193 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 SLC30A9Q6PML9 568 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 TRIM74Q86UV6 250 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 ADHFE1Q8IWW8 467 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 NELL1Q92832 810 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 CADM1Q9BY67 442 aaKnown RBP17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 CDH22Q9UJ99 828 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 RAB23Q9ULC3 237 aa17.73■□□□□ 0.43
PTPDC1-202ENST00000375360 ASLP04424 464 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 RUNX1T1Q06455 604 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 ZNF33AQ06730 810 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 LMAN2Q12907 356 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 KRT73Q86Y46 540 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 CNTD1Q8N815 330 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 LEMD2Q8NC56 503 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 GRIP2Q9C0E4 1043 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 IL36AQ9UHA7 158 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms