RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PBX4Q9BYU1 374 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PRO3102Q9H379 93 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EBF3Q9H4W6 596 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 SEMA4BQ9NPR2 832 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FFAR2O15552 330 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 OR56A5P0C7T3 313 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ENO3P13929 434 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 MMP12P39900 470 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 GBX1Q14549 363 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 MAPRE2Q15555 327 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 KHDC1Q4VXA5 237 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 METTL2BQ6P1Q9 378 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 C16orf89Q6UX73 402 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 HSD11B1LQ7Z5J1 315 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RAVER1Q8IY67 606 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CHCHD4Q8N4Q1 142 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TRAM1L1Q8N609 369 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 KYQ8NBH2 561 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NXPE3Q969Y0 559 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CLPTM1LQ96KA5 538 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 C3orf30Q96M34 536 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 HGH1Q9BTY7 390 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FAM83DQ9H4H8 585 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RDH14Q9HBH5 336 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NDE1Q9NXR1 346 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 DEC1Q9P2X7 70 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EIF2B4Q9UI10 523 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PRPF19Q9UMS4 504 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 L3MBTL1Q9Y468 752 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 C16orf96A6NNT2 1141 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PRRT4C9JH25 899 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PIP5K1BO14986 540 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 GPC4O75487 556 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PRNPP04156 253 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 UROSP10746 265 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CD1EP15812 388 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ACTR3P61158 418 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 HENMT1Q5T8I9 393 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TMEM184AQ6ZMB5 413 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 GET4Q7L5D6 327 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 SYVN1Q86TM6 617 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PHYKPLQ8IUZ5 450 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 DEFB107AQ8IZN7 70 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 HMGCLL1Q8TB92 370 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 UBTD2Q8WUN7 234 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NAT14Q8WUY8 206 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ZFYVE19Q96K21 471 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 SPATA16Q9BXB7 569 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NKX2-4Q9H2Z4 354 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TUBB1Q9H4B7 451 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 MTG2Q9H4K7 406 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 AKTIPQ9H8T0 292 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 THG1LQ9NWX6 298 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NOP53Q9NZM5 478 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NKX1-2Q9UD57 310 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CDH22Q9UJ99 828 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ZNF225Q9UK10 706 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PTBP2Q9UKA9 531 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ASB1Q9Y576 335 aa17.73■□□□□ 0.43
HLA-DQB1-201ENST00000374943 A0A1B0GTL3 188 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PSMD11O00231 422 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 XPAP23025 273 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 SLC6A11P48066 632 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ACADVLP49748 655 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NUDT2P50583 147 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TBL3Q12788 808 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CDKL4Q5MAI5 379 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PPP2R2DQ66LE6 453 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RIPOR1Q6ZS17 1223 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 GPRIN3Q6ZVF9 776 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PARS2Q7L3T8 475 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TECPR1Q7Z6L1 1165 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TIFAQ96CG3 184 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 KCNA7Q96RP8 456 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CCT7Q99832 543 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ZSCAN5AQ9BUG6 496 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EBF2Q9HAK2 575 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 HPS4Q9NQG7 708 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 UTP6Q9NYH9 597 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ST14Q9Y5Y6 855 aa17.72■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EDDM13A0A1B0GTR0 161 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 OTOL1A6NHN0 477 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PSMD12O00232 456 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CRCPO75575 148 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 AP2A2O94973 939 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PSMG1O95456 288 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ATP1B2P14415 290 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 AOAHP28039 575 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 MESP2Q0VG99 397 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FASTKQ14296 549 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RAB30Q15771 203 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RBBP7Q16576 425 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 HNRNPA1L2Q32P51 320 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FBXO48Q5FWF7 155 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 XKR7Q5GH72 579 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 SULT1C3Q6IMI6 304 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ERAP2Q6P179 960 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 DDHD1Q8NEL9 900 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TMIEQ8NEW7 156 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 STMN2Q93045 179 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 377 ms