RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PRKAB1Q9Y478 270 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 PRSS21Q9Y6M0 314 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 SPTBN2O15020 2390 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 MGAT4DA6NG13 374 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 TRIM38O00635 465 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 SH3BP5O60239 455 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 CBFA2T3O75081 653 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 SPAG6O75602 509 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 OR56A5P0C7T3 313 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 ERVK-10P10266 1014 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 ACP5P13686 325 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 VCLP18206 1134 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 CSRP1P21291 193 aaKnown RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 AK4P27144 223 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 TNFRSF8P28908 595 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 SSTR1P30872 391 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 ACTR1BP42025 376 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 LEPRP48357 1165 aaKnown RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 GPX6P59796 221 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 ACTR1AP61163 376 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 MGAT5Q09328 741 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 CTBP1Q13363 440 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 SLMAPQ14BN4 828 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 DEFB133Q30KQ1 61 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 TEDDM1Q5T9Z0 273 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 TRMT10BQ6PF06 316 aaKnown RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 CRTC3Q6UUV7 619 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 C3orf62Q6ZUJ4 267 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 DET1Q7L5Y6 550 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 NAXDQ8IW45 347 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 EID2Q8N6I1 236 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 C2CD4AQ8NCU7 369 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 FAM46DQ8NEK8 389 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 OR2L2Q8NH16 312 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 BAHD1Q8TBE0 780 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.18□□□□□ -0.624e-9■■■■■ 76.2
HSPG2-202ENST00000374676 CCM2Q9BSQ5 444 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 ANKZF1Q9H8Y5 726 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 VPS37BQ9H9H4 285 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 SPATS2LQ9NUQ6 558 aaKnown RBP11.18□□□□□ -0.62
HSPG2-202ENST00000374676 TAAR2Q9P1P5 351 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 PCOLCE2Q9UKZ9 415 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 DOLKQ9UPQ8 538 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 PCDHB1Q9Y5F3 818 aa11.18□□□□□ -0.62
HSPG2-202ENST00000374676 UNC13CQ8NB66 2214 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 H3BMM5 538 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 FFAR2O15552 330 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 SIGLEC6O43699 453 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 FTH1P02794 183 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 ESR1P03372 595 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 IDSP22304 550 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 SLC1A2P43004 574 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 SMAD1Q15797 465 aaKnown RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 KYNUQ16719 465 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 INSCQ1MX18 579 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 RSPO4Q2I0M5 234 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 ZNF658BQ4V348 819 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 ZNF789Q5FWF6 425 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 AGAP9Q5VTM2 703 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 METRNLQ641Q3 311 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 ZCCHC8Q6NZY4 707 aaKnown RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 SLC30A9Q6PML9 568 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 WASH2PQ6VEQ5 465 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 CCNI2Q6ZMN8 369 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 C17orf82Q86X59 251 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 DENND6AQ8IWF6 608 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 BEND7Q8N7W2 519 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 UBXN4Q92575 508 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 GLMNQ92990 594 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 BIRC8Q96P09 236 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 CDC6Q99741 560 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 RTKNQ9BST9 563 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 PPANQ9NQ55 473 aaKnown RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 WASH6PQ9NQA3 447 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 NSMCE4AQ9NXX6 385 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 NCKIPSDQ9NZQ3 722 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 GULP1Q9UBP9 304 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 GNPTGQ9UJJ9 305 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 CDV3Q9UKY7 258 aaKnown RBP11.17□□□□□ -0.62
HSPG2-202ENST00000374676 ACSL5Q9ULC5 683 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 KCNK6Q9Y257 313 aa11.17□□□□□ -0.62
HSPG2-202ENST00000374676 TCRBV9S1A1TA0A576 114 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 A6NCN8 305 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 OR5K4A6NMS3 321 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 HAUS5O94927 633 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 LDOC1O95751 146 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-202ENST00000374676 AHSGP02765 367 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 PKMP14618 531 aaKnown RBP11.16□□□□□ -0.62
HSPG2-202ENST00000374676 EIF3BP55884 814 aaKnown RBP11.16□□□□□ -0.62
HSPG2-202ENST00000374676 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-202ENST00000374676 ILF2Q12905 390 aaKnown RBP11.16□□□□□ -0.62
HSPG2-202ENST00000374676 RPA4Q13156 261 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 TCEA2Q15560 299 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 PLA2G4EQ3MJ16 856 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 PTRHD1Q6GMV3 140 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms