RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CTSL3PQ5NE16 218 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 TMTC4Q5T4D3 741 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 RNF219Q5W0B1 726 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-203ENST00000374490 PSAPL1Q6NUJ1 521 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 PROSER1Q86XN7 944 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 SIDT2Q8NBJ9 832 aaKnown RBP13.78□□□□□ -0.2
HMGCL-203ENST00000374490 TRPV3Q8NET8 790 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 ADAMTS19Q8TE59 1207 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-203ENST00000374490 RMND5BQ96G75 393 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-203ENST00000374490 IGSF21Q96ID5 467 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 KCTD14Q9BQ13 255 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-203ENST00000374490 MUC3BQ9H195 1237 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 IL1RL2Q9HB29 575 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 AGPAT4Q9NRZ5 378 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 TUBA8Q9NY65 449 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-203ENST00000374490 PTBP2Q9UKA9 531 aaKnown RBP13.78□□□□□ -0.2
HMGCL-203ENST00000374490 IKZF3Q9UKT9 509 aa13.78□□□□□ -0.2
HMGCL-203ENST00000374490 VILLO15195 856 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 NIPSNAP2O75323 286 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 BAIAP3O94812 1187 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 TMCC1O94876 653 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 GJB5O95377 273 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 LAG3P18627 525 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 CHRM3P20309 590 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 RPS3P23396 243 aaKnown RBP eCLIP13.77□□□□□ -0.212e-6■■■■■ 45.6
HMGCL-203ENST00000374490 HTR1EP28566 365 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 WDR5P61964 334 aaKnown RBP13.77□□□□□ -0.21
HMGCL-203ENST00000374490 DEFB103AP81534 67 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 TRAF2Q12933 501 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 ATP6AP1Q15904 470 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 ATP6AP1LQ52LC2 224 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 NHSL2Q5HYW2 709 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
HMGCL-203ENST00000374490 CMTR2Q8IYT2 770 aaKnown RBP13.77□□□□□ -0.21
HMGCL-203ENST00000374490 TBC1D21Q8IYX1 336 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 ADGRG5Q8IZF4 528 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 METTL25Q8N6Q8 603 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 EFHBQ8N7U6 833 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 PAPD5Q8NDF8 572 aaKnown RBP13.77□□□□□ -0.21
HMGCL-203ENST00000374490 VWCEQ96DN2 955 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 TMEM169Q96HH4 297 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 NSMCE3Q96MG7 304 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 SLC29A1Q99808 456 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 P2RY12Q9H244 342 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 ALG2Q9H553 416 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 HEBP1Q9NRV9 189 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 GIMAP2Q9UG22 337 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 AFF4Q9UHB7 1163 aaKnown RBP13.77□□□□□ -0.21
HMGCL-203ENST00000374490 ANAPC2Q9UJX6 822 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 STOML2Q9UJZ1 356 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 DHRS7Q9Y394 339 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 ZNF711Q9Y462 761 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 ACTL7AQ9Y615 435 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 SLC30A1Q9Y6M5 507 aa13.77□□□□□ -0.21
HMGCL-203ENST00000374490 CHD5Q8TDI0 1954 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 E2F3O00716 465 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 PRMT5O14744 637 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 OR6B1O95007 311 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 BMP10O95393 424 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 MYOGP15173 224 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 ALDH3B2P48448 385 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 GSK3BP49841 420 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 AP1S1P61966 158 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 GK3PQ14409 553 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 CAPRIN1Q14444 709 aaKnown RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 SMU1Q2TAY7 513 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 MYLK3Q32MK0 819 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 EML3Q32P44 896 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 PITRM1Q5JRX3 1037 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 LYPLAL1Q5VWZ2 237 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 FRA10AC1Q70Z53 315 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 TAS2R42Q7RTR8 314 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 TAS1R1Q7RTX1 841 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 SPRED1Q7Z699 444 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 SPPL2CQ8IUH8 684 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 PIANPQ8IYJ0 282 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 MYO1HQ8N1T3 1032 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 CARNMT1Q8N4J0 409 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 DPP10Q8N608 796 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 TRIML2Q8N7C3 387 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 OSCP1Q8WVF1 389 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 TFAP2CQ92754 450 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 NMD3Q96D46 503 aaKnown RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 TRMT2BQ96GJ1 504 aaKnown RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 EXOC2Q96KP1 924 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 CLK4Q9HAZ1 481 aaKnown RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 MAGEE1Q9HCI5 957 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 CD320Q9NPF0 282 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 EIF2B4Q9UI10 523 aaKnown RBP13.76□□□□□ -0.21
HMGCL-203ENST00000374490 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 PCDHGC4Q9Y5F7 938 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
HMGCL-203ENST00000374490 CCDC160A6NGH7 325 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms