RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 HALP42357 657 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 CTSCP53634 463 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 RPS18P62269 152 aaKnown RBP13.5□□□□□ -0.25
CXCL12-202ENST00000374426 DMPKQ09013 629 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 LAMB3Q13751 1172 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 GTF2H3Q13889 308 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 MESDQ14696 234 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 NOMO1Q15155 1222 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 RPE65Q16518 533 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 TEX44Q53QW1 395 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 CAVIN1Q6NZI2 390 aaKnown RBP13.5□□□□□ -0.25
CXCL12-202ENST00000374426 CYB5D1Q6P9G0 228 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 FAM199XQ6PEV8 388 aaPredicted RBP13.5□□□□□ -0.25
CXCL12-202ENST00000374426 FAM83HQ6ZRV2 1179 aaPredicted RBP13.5□□□□□ -0.25
CXCL12-202ENST00000374426 LUZP1Q86V48 1076 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 TTC30BQ8N4P2 665 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 RASGEF1AQ8N9B8 481 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 SRPK1Q96SB4 655 aaKnown RBP13.5□□□□□ -0.25
CXCL12-202ENST00000374426 MAP3K3Q99759 626 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 XPO4Q9C0E2 1151 aaKnown RBP13.5□□□□□ -0.25
CXCL12-202ENST00000374426 FGF21Q9NSA1 209 aa13.5□□□□□ -0.25
CXCL12-202ENST00000374426 DOPEY1Q5JWR5 2465 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 HIVEP3Q5T1R4 2406 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 A0A0A6YYK5 440 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT1A9O60656 530 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 KCNJ13O60928 360 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 POP7O75817 140 aaKnown RBP13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT1A6P19224 532 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT1A1P22309 533 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT1A4P22310 534 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 PTPN3P26045 913 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 PTPN4P29074 926 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 ACY1Q03154 408 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 SLC18A3Q16572 532 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT8Q16880 541 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 ASTE1Q2TB18 679 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-202ENST00000374426 CPZQ66K79 652 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 KLHL35Q6PF15 583 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 DTX3LQ8TDB6 740 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 BRSK1Q8TDC3 778 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 ZNF514Q96K75 400 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-202ENST00000374426 TEKT5Q96M29 485 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 TTC25Q96NG3 672 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 MAK16Q9BXY0 300 aaKnown RBP13.49□□□□□ -0.25
CXCL12-202ENST00000374426 GPR87Q9BY21 358 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT1A7Q9HAW7 530 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT1A10Q9HAW8 530 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 UGT1A8Q9HAW9 530 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 LRRC4CQ9HCJ2 640 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 PSMD13Q9UNM6 376 aa13.49□□□□□ -0.25
CXCL12-202ENST00000374426 TNRC6AQ8NDV7 1962 aaKnown RBP13.49□□□□□ -0.25
CXCL12-202ENST00000374426 SPTBP11277 2137 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 ESPL1Q14674 2120 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 LOC285095A0A1B0GVY8 99 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 TLCD2A6NGC4 264 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 TTLL8A6PVC2 850 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 VPS4BO75351 444 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 TMEM253P0C7T8 217 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 ZFXP17010 805 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 GNLYP22749 145 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 CD68P34810 354 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 CHRNA4P43681 627 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 WNT3AP56704 352 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 DYNLT1P63172 113 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 CHAF1BQ13112 559 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 IL10RAQ13651 578 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 NFE2L1Q14494 772 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 PLCL1Q15111 1095 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 PRKD1Q15139 912 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 CHRNA6Q15825 494 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 C4orf17Q53FE4 359 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 HIST2H2BCQ6DN03 193 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 CAPRIN2Q6IMN6 1127 aaKnown RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 KDELC1Q6UW63 502 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 FAM151BQ6UXP7 276 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 ZNF517Q6ZMY9 492 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 SYVN1Q86TM6 617 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 BPHLQ86WA6 291 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 KMT5CQ86Y97 462 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 RFX6Q8HWS3 928 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 D2HGDHQ8N465 521 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 GALNT11Q8NCW6 608 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 DDHD1Q8NEL9 900 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 SLC35G2Q8TBE7 412 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 THAP4Q8WY91 577 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 SEC14L1Q92503 715 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 ZCCHC2Q9C0B9 1178 aaKnown RBP13.48□□□□□ -0.25
CXCL12-202ENST00000374426 TRABDQ9H4I3 376 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 MLXIPLQ9NP71 852 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 IL17CQ9P0M4 197 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 VPS4AQ9UN37 437 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 SEC16AO15027 2179 aa13.48□□□□□ -0.25
CXCL12-202ENST00000374426 SHANK1Q9Y566 2161 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 CREBBPQ92793 2442 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 OR5K3A6NET4 321 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 OR2AG2A6NM03 316 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 GAPDHSO14556 408 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms