RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 CXorf49A8MYA2 514 aaPredicted RBP20.28■□□□□ 0.84
SYNC-201ENST00000373484 ANKRD66B4E2M5 251 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 PRAMEF26H0Y7S4 382 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 PDLIM1O00151 329 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 SLC31A1O15431 190 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 PAK4O96013 591 aaPredicted RBP20.28■□□□□ 0.84
SYNC-201ENST00000373484 ALPIP09923 528 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 MLNP12872 115 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 C6P13671 934 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 HNRNPA2B1P22626 353 aaKnown RBP20.28■□□□□ 0.84
SYNC-201ENST00000373484 ASPHQ12797 758 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 PGM2L1Q6PCE3 622 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 UNC5AQ6ZN44 842 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 MARK2Q7KZI7 788 aaKnown RBP20.28■□□□□ 0.84
SYNC-201ENST00000373484 SDCCAG8Q86SQ7 713 aaPredicted RBP20.28■□□□□ 0.84
SYNC-201ENST00000373484 MRGPRX2Q96LB1 330 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 SIGLEC10Q96LC7 697 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 CAPN10Q9HC96 672 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 DNAJC28Q9NX36 388 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 MOCS1Q9NZB8 636 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 CAPN8A6NHC0 703 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 A8MX80 341 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 WNT9AO14904 365 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 KHNYNO15037 678 aaKnown RBP20.27■□□□□ 0.84
SYNC-201ENST00000373484 GLRA3O75311 464 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 ANXA9O76027 345 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 ELFN1P0C7U0 828 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 LHCGRP22888 699 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 HNF1BP35680 557 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 AFF3P51826 1226 aaKnown RBP20.27■□□□□ 0.84
SYNC-201ENST00000373484 GEMP55040 296 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 WNT3AP56704 352 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 SGCGQ13326 291 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 CUL3Q13618 768 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 GALNT3Q14435 633 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 PTPRRQ15256 657 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 TCEAL6Q6IPX3 200 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 KDELC2Q7Z4H8 507 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 DHDDSQ86SQ9 333 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 PDSS2Q86YH6 399 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 TMEM145Q8NBT3 493 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 ACTRT2Q8TDY3 377 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 TCEAL3Q969E4 200 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 RILPQ96NA2 401 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 LENG8Q96PV6 779 aaPredicted RBP20.27■□□□□ 0.84
SYNC-201ENST00000373484 SMIM14Q96QK8 99 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 FZD3Q9NPG1 666 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 SLC6A14Q9UN76 642 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 COMMD3-BMI1R4GMX3 469 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 SCN8AQ9UQD0 1980 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 LOC285095A0A1B0GVY8 99 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 NDST3O95803 873 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 CFIP05156 583 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 TUBB3Q13509 450 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 AGERQ15109 404 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 SF3A2Q15428 464 aaKnown RBP20.27■□□□□ 0.84
SYNC-201ENST00000373484 CNGA3Q16281 694 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 KLHDC8BQ8IXV7 354 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 RMDN1Q96DB5 314 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 PPP1R2P1Q96PQ5 205 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 BTBD9Q96Q07 612 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 LYSMD1Q96S90 227 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 MLPHQ9BV36 600 aaPredicted RBP20.27■□□□□ 0.84
SYNC-201ENST00000373484 DCDC2Q9UHG0 476 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 APOBEC2Q9Y235 224 aaKnown RBP20.27■□□□□ 0.84
SYNC-201ENST00000373484 COQ6Q9Y2Z9 468 aa20.27■□□□□ 0.84
SYNC-201ENST00000373484 AAR2Q9Y312 384 aaKnown RBP20.27■□□□□ 0.84
SYNC-201ENST00000373484 GVINP1Q7Z2Y8 2422 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 CASQ2O14958 399 aaPredicted RBP20.26■□□□□ 0.83
SYNC-201ENST00000373484 RAD51BO15315 384 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 EPOP01588 193 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 CD38P28907 300 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 AKT2P31751 481 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 CPA2P48052 419 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 ARHGAP8P85298 464 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 PRPSAP1Q14558 356 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 LIN52Q52LA3 116 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 PRR23CQ6ZRP0 262 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 TSPAN33Q86UF1 283 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 PHC3Q8NDX5 983 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 DENND6BQ8NEG7 585 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 IPMKQ8NFU5 416 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 OR6Y1Q8NGX8 325 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 CMTM5Q96DZ9 223 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 MYOCQ99972 504 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 MECRQ9BV79 373 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 SPATA16Q9BXB7 569 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 NUSAP1Q9BXS6 441 aaKnown RBP20.26■□□□□ 0.83
SYNC-201ENST00000373484 SMYD2Q9NRG4 433 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 AASDHPPTQ9NRN7 309 aa20.26■□□□□ 0.83
SYNC-201ENST00000373484 A0A1W2PR77 199 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 AVILO75366 819 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 METTL18O95568 372 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 SERPINE1P05121 402 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 PABPC4LP0CB38 370 aaKnown RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 CSNK1EP49674 416 aaKnown RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 CES4AQ5XG92 561 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 CRTC1Q6UUV9 634 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 CBARPQ8N350 705 aaPredicted RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 FBXO27Q8NI29 283 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms