RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 EDEM1Q92611 657 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 CCDC120Q96HB5 630 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 MAELQ96JY0 434 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 OR5B12Q96R08 314 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 USP6P35125 1406 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 SLITRK5O94991 958 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 CYB5AP00167 134 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 CSTF2P33240 577 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 PPM1AP35813 382 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NRG1Q02297 640 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 PPATQ06203 517 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 LARS2Q15031 903 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NPTX1Q15818 432 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 KLHL35Q6PF15 583 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 CRTC1Q6UUV9 634 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 DNAJB7Q7Z6W7 309 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ITPAQ9BY32 194 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 PCDHB16Q9NRJ7 776 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 TIMM8BQ9Y5J9 83 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NCANO14594 1321 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NUP153P49790 1475 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 PLA2R1Q13018 1463 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 RFPL1O75677 317 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NDUFB10O96000 172 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 MAPTP10636 758 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 VAMP1P23763 118 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 MPSTP25325 297 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 CD86P42081 329 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 CCR10P46092 362 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NKX2-3Q8TAU0 364 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 C1QTNF7Q9BXJ2 289 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 FRMPD4Q14CM0 1322 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 CNTNAP2Q9UHC6 1331 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 TBX10O75333 385 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 IGSF6O95976 241 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 SRSF11Q05519 484 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 MAMLD1Q13495 774 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ISOC1Q96CN7 298 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 LRRC42Q9Y546 428 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 A0A1W2PPM1 405 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 XPNPEP2O43895 674 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 TMED4Q7Z7H5 227 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ESX1Q8N693 406 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 C11orf65Q8NCR3 313 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 C16orf58Q96GQ5 468 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 PAQR5Q9NXK6 330 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 QPCTLQ9NXS2 382 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 TRAV6A0A075B6T7 132 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 COL6A1P12109 1028 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NKX6-1P78426 367 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 DEFA6Q01524 100 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 PPP3CAQ08209 521 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 TEAD4Q15561 434 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ZDHHC21Q8IVQ6 265 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 LENG8Q96PV6 779 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-201ENST00000371817 HMGXB4Q9UGU5 601 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 NDOR1Q9UHB4 597 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 HCN2Q9UL51 889 aa15.12■□□□□ 0.01
COL5A1-201ENST00000371817 ATP10AO60312 1499 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 BHMG1C9JSJ3 638 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 IFNA10P01566 189 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 IFNA4P05014 189 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 CD79BP40259 229 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 LUMP51884 338 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 PIGWQ7Z7B1 504 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF563Q8TA94 476 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 JPH3Q8WXH2 748 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 C7orf50Q9BRJ6 194 aaKnown RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 PSMD9O00233 223 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 ARSKQ6UWY0 536 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 SERPINB11Q96P15 392 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 PCDHGB7Q9Y5F8 929 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 HSDL1Q3SXM5 330 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 MRPS31Q92665 395 aaKnown RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 PAEPP09466 180 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 RAB3BP20337 219 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 SLC6A3Q01959 620 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 COL28A1Q2UY09 1125 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 DPY19L3Q6ZPD9 716 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 OR7G2Q8NG99 324 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 STON2Q8WXE9 905 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 RERGQ96A58 199 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 LENG9Q96B70 501 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 HTATIP2Q9BUP3 242 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 WDR55Q9H6Y2 383 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 LRTM1Q9HBL6 345 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 CAMSAP1Q5T5Y3 1602 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 TLE2Q04725 743 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 PDSS2Q86YH6 399 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 SPATA6LQ8N4H0 392 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 USP29Q9HBJ7 922 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 C14orf166Q9Y224 244 aaKnown RBP15.11■□□□□ 0.01
COL5A1-201ENST00000371817 SCELO95171 688 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 TKFCQ3LXA3 575 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 RETSATQ6NUM9 610 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 SLC30A6Q6NXT4 461 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms