RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CXCR2P25025 360 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 TNFAIP8L3Q5GJ75 292 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 SLC22A16Q86VW1 577 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 UBE2J2Q8N2K1 259 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 PGBD3Q8N328 593 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 MARVELD2Q8N4S9 558 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 ZBTB2Q8N680 514 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 TRPV1Q8NER1 839 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 BORCS6Q96GS4 357 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 MED28Q9H204 178 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 SGK2Q9HBY8 427 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 VPS51Q9UID3 782 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 STON1Q9Y6Q2 735 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 RFPL1O75677 317 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 PCDH8O95206 1070 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 PENKP01210 267 aaPredicted RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 RHOQP17081 205 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 BRCC3P46736 316 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 ACADVLP49748 655 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 CRYBB1P53674 252 aaPredicted RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 TLR1Q15399 786 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 GCNT6Q5T4J0 391 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 ZNF438Q7Z4V0 828 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 ADGRG6Q86SQ4 1221 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 TAC4Q86UU9 113 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 CLIP4Q8N3C7 705 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 TRPV3Q8NET8 790 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 WDR48Q8TAF3 677 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 FAIM2Q9BWQ8 316 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 SLC39A8Q9C0K1 460 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 RAD18Q9NS91 495 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 ZNF224Q9NZL3 707 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 TMEM9Q9P0T7 183 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 SLC27A5Q9Y2P5 690 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 CCNYL3P0C7X3 344 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 BMP7P18075 431 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 CDH12P55289 794 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 IKBKEQ14164 716 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 TIGD6Q17RP2 521 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 MYLK3Q32MK0 819 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 PLEKHG6Q3KR16 790 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 BHLHB9Q6PI77 547 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 HID1Q8IV36 788 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 SMG8Q8ND04 991 aaKnown RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 GPR152Q8TDT2 470 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 DENND1AQ8TEH3 1009 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 STON2Q8WXE9 905 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 IRGQQ8WZA9 623 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 BTN2A3PQ96KV6 586 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 EXD2Q9NVH0 621 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 PCDHGA10Q9Y5H3 936 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 FMN2Q9NZ56 1722 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 A6NHS1 94 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 ARHGEF33A8MVX0 844 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 NOS1APO75052 506 aaPredicted RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 STARP49675 285 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 ERVK-8P63133 956 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 AKIRIN2Q53H80 203 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 RNASE12Q5GAN4 147 aaKnown RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 SIDT2Q8NBJ9 832 aaKnown RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 FEM1CQ96JP0 617 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 GFM1Q96RP9 751 aaKnown RBP15.75■□□□□ 0.11
COL17A1-202ENST00000369733 OAS1P00973 400 aaKnown RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 C8BP07358 591 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 AKR1D1P51857 326 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 NKIRAS2Q9NYR9 191 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 ACTR3BQ9P1U1 418 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 CAMTA1Q9Y6Y1 1673 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 KPNA3O00505 521 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 SLC30A4O14863 429 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 RSL1D1O76021 490 aaKnown RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 MAPKAPK2P49137 400 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 NCCRP1Q6ZVX7 275 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 CDCA5Q96FF9 252 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 MAGEE1Q9HCI5 957 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 DNAJC11Q9NVH1 559 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 COL1A2P08123 1366 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 FAM92AA1XBS5 289 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 AKR1A1P14550 325 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 TNNI3P19429 210 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 ATN1P54259 1190 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 PIK3R6Q5UE93 754 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 LIN54Q6MZP7 749 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 GPR153Q6NV75 609 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 C11orf65Q8NCR3 313 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 SLC16A10Q8TF71 515 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 MYO19Q96H55 970 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 PRR11Q96HE9 360 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 PDCD10Q9BUL8 212 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 SLIT2O94813 1529 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 AP3D1O14617 1153 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 SNAPC1Q16533 368 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 FAM92BQ6ZTR7 304 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 LMO3Q8TAP4 145 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 CSGALNACT1Q8TDX6 532 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 GTPBP3Q969Y2 492 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms