RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 BRAT1Q6PJG6 821 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 LRRN1Q6UXK5 716 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ZNF782Q6ZMW2 699 aaPredicted RBP10.32□□□□□ -0.76
PRDM1-201ENST00000369089 MCOLN2Q8IZK6 566 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 FAM151AQ8WW52 585 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 TMEM138Q9NPI0 162 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ERVK13-1Q9NX77 482 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ZNF70Q9UC06 446 aaPredicted RBP10.32□□□□□ -0.76
PRDM1-201ENST00000369089 RIMS3Q9UJD0 308 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 COPS3Q9UNS2 423 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 CDKN2CP42773 168 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 PCP4P48539 62 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 CDC42P60953 191 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 NCS1P62166 190 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 LIPMQ5VYY2 423 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 STEAP3Q658P3 488 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 LIN54Q6MZP7 749 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 BEND5Q7L4P6 421 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 VGLL2Q8N8G2 317 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 MCPH1Q8NEM0 835 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 RDH11Q8TC12 318 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ABCG4Q9H172 646 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 METTL8Q9H825 291 aaKnown RBP10.32□□□□□ -0.76
PRDM1-201ENST00000369089 TREM1Q9NP99 234 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 CLN6Q9NWW5 311 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 AKT3Q9Y243 479 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 DLGAP4Q9Y2H0 992 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 PLIN3O60664 434 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 PLA2G6O60733 806 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 FDX1P10109 184 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 UBA1P22314 1058 aaKnown RBP10.32□□□□□ -0.76
PRDM1-201ENST00000369089 FMO3P31513 532 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 EEF1A1P68104 462 aaKnown RBP10.32□□□□□ -0.76
PRDM1-201ENST00000369089 EEF1A2Q05639 463 aaKnown RBP10.32□□□□□ -0.76
PRDM1-201ENST00000369089 MADCAM1Q13477 382 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 EEF1A1P5Q5VTE0 462 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 SLITRK4Q8IW52 837 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 PGBD3Q8N328 593 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ZFAND1Q8TCF1 268 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 SLC38A4Q969I6 547 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 MMP19Q99542 508 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 S100A13Q99584 98 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 GPR63Q9BZJ6 419 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 SP110Q9HB58 689 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 IL1RAPQ9NPH3 570 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ASB14A6NK59 587 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 VPS4BO75351 444 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 GCATO75600 419 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 KRT33AO76009 404 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 MEOX2P50222 304 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 GBX2P52951 348 aaPredicted RBP10.31□□□□□ -0.76
PRDM1-201ENST00000369089 GAD2Q05329 585 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 RGS1Q08116 209 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 DCAF12L1Q5VU92 463 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 SLC47A2Q86VL8 602 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 APOBEC3FQ8IUX4 373 aaKnown RBP10.31□□□□□ -0.76
PRDM1-201ENST00000369089 LYSMD2Q8IV50 215 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 FAM126BQ8IXS8 530 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 OR13F1Q8NGS4 319 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 SLC45A3Q96JT2 553 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
PRDM1-201ENST00000369089 WACQ9BTA9 647 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 OLAHQ9NV23 265 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 TMEM181Q9P2C4 612 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 ASH2LQ9UBL3 628 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 ADAM28Q9UKQ2 775 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 ALG5Q9Y673 324 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 CDC7O00311 574 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 FPGTO14772 594 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 G0S2P27469 103 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 AVPR1AP37288 418 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 FNTBP49356 437 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 GBE1Q04446 702 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 PIWIL4Q7Z3Z4 852 aaKnown RBP10.31□□□□□ -0.76
PRDM1-201ENST00000369089 LURAP1LQ8IV03 231 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 GPALPP1Q8IXQ4 340 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 DPP10Q8N608 796 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 CELF2-AS1Q8N7Q2 184 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 NDNFQ8TB73 568 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 C11orf24Q96F05 449 aaPredicted RBP10.31□□□□□ -0.76
PRDM1-201ENST00000369089 FEM1CQ96JP0 617 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 RDH12Q96NR8 316 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 LXNQ9BS40 222 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 CLCA1A8K7I4 914 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 SOCS2O14508 198 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 SLC9A3R1O14745 358 aaPredicted RBP10.31□□□□□ -0.76
PRDM1-201ENST00000369089 CASKO14936 926 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 ADAM12O43184 909 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 EFCAB14O75071 495 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 PMPCBO75439 489 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 SBK2P0C263 348 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 LBPP18428 481 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 SDC4P31431 198 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 NPY2RP49146 381 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 RGS6P49758 472 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 HADHBP55084 474 aaKnown RBP10.31□□□□□ -0.76
PRDM1-201ENST00000369089 BCL7AQ4VC05 210 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 HID1Q8IV36 788 aa10.31□□□□□ -0.76
PRDM1-201ENST00000369089 UNC5BQ8IZJ1 945 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms