RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TMEM209Q96SK2 561 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ATOH8Q96SQ7 321 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 C3orf18Q9UK00 162 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 UGT2A1Q9Y4X1 527 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 CASP8AP2Q9UKL3 1982 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ARNTLO00327 626 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 IFRD1O00458 451 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 PPP6CO00743 305 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 RGS13O14921 159 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 SLC16A6O15403 523 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 FGF10O15520 208 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 RECQL4O94761 1208 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 KCNE1P15382 129 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 HOXB6P17509 224 aaKnown RBP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 SERPINH1P50454 418 aaKnown RBP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 TPTEP56180 551 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 WNT3AP56704 352 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 MAP3K7CLP57077 242 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ERVK-8P63133 956 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 CLCQ05315 142 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ADPRMQ3LIE5 342 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 PAGE2BQ5JRK9 111 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 SLC22A16Q86VW1 577 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 SLC7A5P1Q8MH63 180 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 DTWD1Q8N5C7 304 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 OR52E4Q8NGH9 312 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 ZNF599Q96NL3 588 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 YME1L1Q96TA2 773 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 MED10Q9BTT4 135 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 CFHR5Q9BXR6 569 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 RGS18Q9NS28 235 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 INTS7Q9NVH2 962 aaKnown RBP17.23■□□□□ 0.35
CHTOP-203ENST00000368690 SMPD4Q9NXE4 827 aa17.23■□□□□ 0.35
CHTOP-203ENST00000368690 MROH6A6NGR9 719 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 SIX3O95343 332 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 UFM1P61960 85 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 PHC1P78364 1004 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 KCNAB2Q13303 367 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 PCBP1Q15365 356 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 XKR4Q5GH76 650 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 NOTUMQ6P988 496 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 TUBA3EQ6PEY2 450 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 ADCK1Q86TW2 530 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 ZFAND4Q86XD8 727 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 RHOXF1Q8NHV9 184 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 KCNA7Q96RP8 456 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 PARVBQ9HBI1 364 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 RBM22Q9NW64 420 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 OSER1Q9NX31 292 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 BTRCQ9Y297 605 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 SMIM28A0A1B0GU29 152 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 C17orf102A2RUQ5 167 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 TREHO43280 583 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 KPNA6O60684 536 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 MRPS14O60783 128 aaKnown RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 BMP1P13497 986 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 EMX1Q04741 257 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 PFKFB4Q16877 469 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 SLX4IPQ5VYV7 408 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 DSG4Q86SJ6 1040 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 RBM23Q86U06 439 aaKnown RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 OR52K2Q8NGK3 314 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 ZNF296Q8WUU4 475 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 RORBQ92753 470 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 POP5Q969H6 163 aaKnown RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 NSUN5Q96P11 429 aaKnown RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 ZNF300Q96RE9 604 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 C1QTNF3Q9BXJ4 246 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 SLC25A51Q9H1U9 297 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 TRIT1Q9H3H1 467 aaKnown RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 PAK1IP1Q9NWT1 392 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-203ENST00000368690 POU2F3Q9UKI9 436 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 USP22Q9UPT9 525 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 PMF1-BGLAPU3KQ54 211 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 V9GYQ6 96 aa17.22■□□□□ 0.35
CHTOP-203ENST00000368690 LOC100130705A0A1B0GUX0 176 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 SAGE2PA6NJ88 616 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 TTC34A8MYJ7 566 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 SNX2O60749 519 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 CHEK2O96017 543 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 NR4A1P22736 598 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 CES1P23141 567 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 PIGAP37287 484 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 PRKG2Q13237 762 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 OR4D1Q15615 310 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 SYT6Q5T7P8 510 aaPredicted RBP17.21■□□□□ 0.35
CHTOP-203ENST00000368690 DLEU7Q6UYE1 221 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 NANOGNBQ7Z5D8 188 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 AKAP14Q86UN6 197 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 PIM3Q86V86 326 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
CHTOP-203ENST00000368690 OR8J3Q8NGG0 315 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 DNAJB3Q8WWF6 145 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 BTBD2Q9BX70 525 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 HOXD1Q9GZZ0 328 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 CATSPERBQ9H7T0 1116 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 SLAMF8Q9P0V8 285 aa17.21■□□□□ 0.35
CHTOP-203ENST00000368690 MAGED1Q9Y5V3 778 aaPredicted RBP17.21■□□□□ 0.35
CHTOP-203ENST00000368690 TOR1BO14657 336 aa17.21■□□□□ 0.34
CHTOP-203ENST00000368690 KERAO60938 352 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms