RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 DPEP2Q9H4A9 486 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 SMYD2Q9NRG4 433 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 SIRPGQ9P1W8 387 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 ZFATQ9P243 1243 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 GPR34Q9UPC5 381 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 BTBD3Q9Y2F9 522 aa13.68□□□□□ -0.22
TPM3-211ENST00000368531 TRBV23OR9-2A0A075B6M9 112 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 AP2A2O94973 939 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 ZNF883P0CG24 379 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 MYF5P13349 255 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 CD59P13987 128 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 TNFRSF8P28908 595 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 PRLHRP49683 370 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 PMS2P54278 862 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 CSE1LP55060 971 aaKnown RBP13.67□□□□□ -0.22
TPM3-211ENST00000368531 FRG1Q14331 258 aaKnown RBP13.67□□□□□ -0.22
TPM3-211ENST00000368531 NFE2L1Q14494 772 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 EFTUD2Q15029 972 aaKnown RBP eCLIP13.67□□□□□ -0.222e-18■■■■□ 20.8
TPM3-211ENST00000368531 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
TPM3-211ENST00000368531 BCL7AQ4VC05 210 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 C11orf96Q7Z7L8 435 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 SFTPA2Q8IWL1 248 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 LMNTD2Q8IXW0 634 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 CFAP206Q8IYR0 622 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 PPM1NQ8N819 430 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 LKAAEAR1Q8TD35 194 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 RHBDD1Q8TEB9 315 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 LPGAT1Q92604 370 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 ATXN7L3BQ96GX2 97 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 CAMK1GQ96NX5 476 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 CCM2Q9BSQ5 444 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 P2RY12Q9H244 342 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 SARS2Q9NP81 518 aaKnown RBP13.67□□□□□ -0.22
TPM3-211ENST00000368531 SPATS2LQ9NUQ6 558 aaKnown RBP13.67□□□□□ -0.22
TPM3-211ENST00000368531 INTS10Q9NVR2 710 aaKnown RBP13.67□□□□□ -0.22
TPM3-211ENST00000368531 TAAR2Q9P1P5 351 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 GULP1Q9UBP9 304 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 GNPTGQ9UJJ9 305 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 CSNK1G3Q9Y6M4 447 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 VPS13AQ96RL7 3174 aa13.67□□□□□ -0.22
TPM3-211ENST00000368531 ARHGEF17Q96PE2 2063 aaPredicted RBP13.67□□□□□ -0.22
TPM3-211ENST00000368531 MGAT4DA6NG13 374 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 B4DGG1 531 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 LMO7DNF2Z398 122 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 F8W8V4 182 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 TRIM38O00635 465 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 SH3BP5O60239 455 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 NIPSNAP2O75323 286 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 AHSGP02765 367 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 FTH1P02794 183 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 VCLP18206 1134 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 RPL10P27635 214 aaKnown RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 GABRB3P28472 473 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 STX2P32856 288 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 PHBP35232 272 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 ARHGAP8P85298 464 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 LRP8Q14114 963 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 KBTBD12Q3ZCT8 623 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 CTSL3PQ5NE16 218 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 FAM83HQ6ZRV2 1179 aaPredicted RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 STRA8Q7Z7C7 330 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 RELL1Q8IUW5 271 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 SPNS2Q8IVW8 549 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 CNTN4Q8IWV2 1026 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 LILRA3Q8N6C8 439 aaPredicted RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 EIF1ADQ8N9N8 165 aaKnown RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 SCG3Q8WXD2 468 aaKnown RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 ELMO1Q92556 727 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 CDKL2Q92772 493 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 NDNQ99608 321 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 TIMM29Q9BSF4 260 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 PRDM8Q9NQV8 689 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 PSMD13Q9UNM6 376 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 PCDHGB2Q9Y5G2 931 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 PSAT1Q9Y617 370 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 DNMT3AQ9Y6K1 912 aaPredicted RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 ASCC3Q8N3C0 2202 aaKnown RBP13.66□□□□□ -0.22
TPM3-211ENST00000368531 CABIN1Q9Y6J0 2220 aa13.66□□□□□ -0.22
TPM3-211ENST00000368531 FAM159BA6NKW6 160 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 PDZK1P1A8MUH7 402 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 QSOX1O00391 747 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 FLRT2O43155 660 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 SIGLEC6O43699 453 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 SPAG6O75602 509 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 EML2O95834 649 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 GIMD1P0DJR0 217 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 ALPPL2P10696 532 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 CHRM3P20309 590 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 RPS3P23396 243 aaKnown RBP eCLIP13.65□□□□□ -0.22
TPM3-211ENST00000368531 LEPRP48357 1165 aaKnown RBP13.65□□□□□ -0.22
TPM3-211ENST00000368531 SLC14A1Q13336 389 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.22
TPM3-211ENST00000368531 WDR93Q6P2C0 686 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 ZNF549Q6P9A3 640 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms