RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 PRLHRP49683 370 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 DRG2P55039 364 aaKnown RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 ANKRD20A4Q4UJ75 823 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 FASTKD1Q53R41 847 aaKnown RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 KIAA0930Q6ICG6 404 aaPredicted RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 FBXO38Q6PIJ6 1188 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 AMZ2Q86W34 360 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 LILRA3Q8N6C8 439 aaPredicted RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 ANKRD7Q92527 254 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 NAT6Q93015 286 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 ZNF514Q96K75 400 aaPredicted RBP14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 ERP44Q9BS26 406 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 SCNM1Q9BWG6 230 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 LRIT1Q9P2V4 623 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 MAD1L1Q9Y6D9 718 aa14.82□□□□□ -0.04
SMPDL3A-201ENST00000368440 FAM237BA0A1B0GVD1 139 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 FAM149AA5PLN7 773 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 PPM1DO15297 605 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 CD3EAPO15446 510 aaKnown RBP14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 OPA1O60313 960 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 BRAFP15056 766 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 GLB1P16278 677 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 ARCN1P48444 511 aaKnown RBP14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 DMPKQ09013 629 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 ITIH4Q14624 930 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 HES3Q5TGS1 186 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 IYDQ6PHW0 289 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 MAATS1Q7Z4T9 603 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 IGDCC3Q8IVU1 814 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 SFRP1Q8N474 314 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 HEXDCQ8WVB3 486 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 WDR83Q9BRX9 315 aaKnown RBP14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 ANAPC5Q9UJX4 755 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 WDR37Q9Y2I8 494 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 RPS6KL1Q9Y6S9 549 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 AKAP13Q12802 2813 aa14.81□□□□□ -0.04
SMPDL3A-201ENST00000368440 ZCWPW2A0A1B0GU75 182 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 PDZK1P1A8MUH7 402 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 NSG1P42857 185 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 TUBB4BP68371 445 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 BBS9Q3SYG4 887 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 HP1BP3Q5SSJ5 553 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 DUPD1Q68J44 220 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 PACS1Q6VY07 963 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 TMEM135Q86UB9 458 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 ZNF761Q86XN6 746 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 Q8N9G6 341 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 MAPK15Q8TD08 544 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 STAMBPL1Q96FJ0 436 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 LINC00615Q96LM1 132 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 GRHL1Q9NZI5 618 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 DMGDHQ9UI17 866 aaKnown RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 PSMD13Q9UNM6 376 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 DNMT3AQ9Y6K1 912 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 NCOR2Q9Y618 2525 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 MGAT4DA6NG13 374 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 NUDT21O43809 227 aaKnown RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 F7P08709 466 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 VCLP18206 1134 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 IDSP22304 550 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 VSNL1P62760 191 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 ZNF658BQ4V348 819 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 ARMC3Q5W041 872 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 TMPRSS7Q7RTY8 843 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 ZNF438Q7Z4V0 828 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 UNC5BQ8IZJ1 945 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 OR2L2Q8NH16 312 aa14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 ZNF624Q9P2J8 865 aaPredicted RBP14.8□□□□□ -0.04
SMPDL3A-201ENST00000368440 PRAMEF33A0A0G2JMD5 474 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 A0A1W2PQM1 296 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 MAGEB16A2A368 324 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 OR52A4PA6NMU1 304 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 USP1O94782 785 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 CCL7P80098 99 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 E2F1Q01094 437 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 CLCA4Q14CN2 919 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 TRADDQ15628 312 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 LYPLAL1Q5VWZ2 237 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 ABRAXAS1Q6UWZ7 409 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 CERS6Q6ZMG9 384 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 SPRED1Q7Z699 444 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 GSPT2Q8IYD1 628 aaKnown RBP14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 OTUD6BQ8N6M0 293 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 OR6C4Q8NGE1 309 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 EBNA1BP2Q99848 306 aaKnown RBP14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 SYNDIG1Q9H7V2 258 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 PLAC1Q9HBJ0 212 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 CHMP2BQ9UQN3 213 aa14.79□□□□□ -0.04
SMPDL3A-201ENST00000368440 ESYT3A0FGR9 886 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 RHPN2P1A8MT19 583 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 KCNJ13O60928 360 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 AP2A2O94973 939 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 CDK4P11802 303 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 PGAM1P18669 254 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 SLC19A1P41440 591 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 FASLGP48023 281 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 OR1D5P58170 312 aa14.78□□□□□ -0.04
SMPDL3A-201ENST00000368440 UBE2IP63279 158 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms