RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CLN6Q9NWW5 311 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 ADAMTS6Q9UKP5 1117 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 FAM25AB3EWG3 89 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 FAM25CB3EWG5 89 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 FAM25GB3EWG6 89 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 CXCR6O00574 342 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 CNTN5O94779 1100 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 TSPAN19P0C672 248 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 PPIBP23284 216 aaKnown RBP11.55□□□□□ -0.56
COPA-202ENST00000368069 AP1S1P61966 158 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 SULT1C3Q6IMI6 304 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 ARMC6Q6NXE6 501 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 GALNT18Q6P9A2 607 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 KRT78Q8N1N4 520 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 KBTBD8Q8NFY9 601 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 FBXO27Q8NI29 283 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 QRFPRQ96P65 431 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 TMEM209Q96SK2 561 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 ADAMTS10Q9H324 1103 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 CCSER2Q9H7U1 834 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 FNIP2Q9P278 1114 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
COPA-202ENST00000368069 CDC7O00311 574 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 ANGPTL1O95841 491 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 IL1BP01584 269 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 HOXB6P17509 224 aaKnown RBP11.55□□□□□ -0.56
COPA-202ENST00000368069 CDK9P50750 372 aaKnown RBP11.55□□□□□ -0.56
COPA-202ENST00000368069 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 CYP20A1Q6UW02 462 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 C14orf80Q86SX3 495 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 OOSP2Q86WS3 158 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 POC5Q8NA72 575 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 KBTBD7Q8WVZ9 684 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 ASZ1Q8WWH4 475 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 CENPIQ92674 756 aaPredicted RBP11.55□□□□□ -0.56
COPA-202ENST00000368069 GALPQ9UBC7 116 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 TRIM17Q9Y577 477 aa11.55□□□□□ -0.56
COPA-202ENST00000368069 A0A0U1RQF3 1178 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PRR23D1E9PI22 279 aaPredicted RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 XYLBO75191 536 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PRR23D2P0DMB1 279 aaPredicted RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 CDH3P22223 829 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 SLC6A2P23975 617 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 PRKCQQ04759 706 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PTPRCAPQ14761 206 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PPP1R3AQ16821 1122 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 TRIM40Q6P9F5 258 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 IFNLR1Q8IU57 520 aaPredicted RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 HM13Q8TCT9 377 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 KCNA7Q96RP8 456 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 DHRS4Q9BTZ2 278 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 IFT80Q9P2H3 777 aaPredicted RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 CIDEBQ9UHD4 219 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 LAMB1P07942 1786 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 SDHDO14521 159 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 NOBOXO60393 691 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 SLC35E2BP0CK96 405 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 RAP2AP10114 183 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 HNF4AP41235 474 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 GSK3BP49841 420 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 EEFSECP57772 596 aaKnown RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 FBXW4P57775 412 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 RAVER1Q8IY67 606 aaKnown RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 UTP4Q969X6 686 aaKnown RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 PLD4Q96BZ4 506 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PPCDCQ96CD2 204 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 NSMCE3Q96MG7 304 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 ZNF599Q96NL3 588 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 MRM3Q9HC36 420 aaKnown RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 OGDHLQ9ULD0 1010 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 TLL2Q9Y6L7 1015 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 H3BSA7 217 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 NBNO60934 754 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 DNAJB13P59910 316 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 MPPE1Q53F39 396 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 MS4A13Q5J8X5 152 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 TRIQKQ629K1 86 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PLEKHM3Q6ZWE6 761 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 R3HCC1LQ7Z5L2 792 aaKnown RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 ZNF554Q86TJ5 538 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 EBPLQ9BY08 206 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 C1orf109Q9NX04 203 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 MIOSQ9NXC5 875 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 CD84Q9UIB8 345 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PDE10AQ9Y233 779 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 CAB39Q9Y376 341 aaPredicted RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 NEDD8-MDP1E9PL57 170 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 MFN2O95140 757 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 FABP3P05413 133 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 COL6A1P12109 1028 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 TPP2P29144 1249 aaPredicted RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 HOXA11P31270 313 aaPredicted RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 KCNQ1P51787 676 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 PURAQ00577 322 aaKnown RBP11.54□□□□□ -0.56
COPA-202ENST00000368069 ERICH5Q6P6B1 374 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 DSG4Q86SJ6 1040 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 EPHX4Q8IUS5 362 aa11.54□□□□□ -0.56
COPA-202ENST00000368069 TSGA13Q96PP4 275 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms