RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ARHGEF38Q9NXL2 777 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 ZNF639Q9UID6 485 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 WDR37Q9Y2I8 494 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 SLC27A5Q9Y2P5 690 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 TRAF6Q9Y4K3 522 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 SLC30A1Q9Y6M5 507 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 GREB1Q4ZG55 1949 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 CHD8Q9HCK8 2581 aa11.42□□□□□ -0.58
USF1-201ENST00000368019 MYOCOSA0A1B0GUC4 107 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 SOBPA7XYQ1 873 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 FAM72CH0Y354 149 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 K7ESF4 209 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 DLGAP1O14490 977 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 SOCS2O14508 198 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 SLC7A4O43246 635 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 NOL3O60936 208 aaKnown RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 DNAJB5O75953 348 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 JCHAINP01591 159 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 PDGFRBP09619 1106 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 ATP6V1B2P21281 511 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 MSX2P35548 267 aaPredicted RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 CAPGP40121 348 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 SLC1A2P43004 574 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 HLCSP50747 726 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 KCNC4Q03721 635 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 NME3Q13232 169 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 TMED1Q13445 227 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 AASDHQ4L235 1098 aaPredicted RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 BRMS1LQ5PSV4 323 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 TBCELQ5QJ74 424 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 FAM72AQ5TYM5 149 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 LAIR1Q6GTX8 287 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 FAM72DQ6L9T8 149 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 OGFOD2Q6N063 350 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 DUS1LQ6P1R4 473 aaKnown RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 TXNDC11Q6PKC3 985 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 LYSMD3Q7Z3D4 306 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 FAM72BQ86X60 149 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 TP53INP2Q8IXH6 220 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 ADGRG5Q8IZF4 528 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 FAM156AQ8NDB6 213 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 OR10T2Q8NGX3 314 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 CSGALNACT1Q8TDX6 532 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 OSCP1Q8WVF1 389 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 CANT1Q8WVQ1 401 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 TMIGD2Q96BF3 282 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 MAGED4Q96JG8 741 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 MARK4Q96L34 752 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 PPP1R36Q96LQ0 422 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 RDH12Q96NR8 316 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 CIB1Q99828 191 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 ULBP1Q9BZM6 244 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 SEMA6AQ9H2E6 1030 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 RPF2Q9H7B2 306 aaKnown RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 NOL11Q9H8H0 719 aaKnown RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 INTS10Q9NVR2 710 aaKnown RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 RHBDL2Q9NX52 303 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 OBP2AQ9NY56 170 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 PKD2L2Q9NZM6 624 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 CCDC167Q9P0B6 97 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 LAMA1P25391 3075 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 MAP1BP46821 2468 aaKnown RBP11.41□□□□□ -0.58
USF1-201ENST00000368019 ANAPC1Q9H1A4 1944 aa11.41□□□□□ -0.58
USF1-201ENST00000368019 SLC38A8A6NNN8 435 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 ZNF839A8K0R7 811 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 WASH4PA8MWX3 477 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 TMEM233B4DJY2 109 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 NME4O00746 187 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 MATN3O15232 486 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 HRO43593 1189 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 LRP3O75074 770 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 TIPRLO75663 272 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SOAT2O75908 522 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 LRIG2O94898 1065 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 RETP07949 1114 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 ODC1P11926 461 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 GFAPP14136 432 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 TCN1P20061 433 aaPredicted RBP11.4□□□□□ -0.58
USF1-201ENST00000368019 HOXA6P31267 233 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 CTHP32929 405 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 AVPR1AP37288 418 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 GRIA3P42263 894 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 ABCG1P45844 678 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SOX9P48436 509 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 LHX1P48742 406 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 ENTPD1P49961 510 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 TNK2Q07912 1038 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 DMWDQ09019 674 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 EPS8Q12929 822 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 ZNF678Q5SXM1 525 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 CCNYL2Q5T2Q4 361 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 NEPROQ6NW34 567 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 RANBP10Q6VN20 620 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SPATA19Q7Z5L4 167 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 RALGPS2Q86X27 583 aaPredicted RBP11.4□□□□□ -0.58
USF1-201ENST00000368019 EPHX4Q8IUS5 362 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 FUNDC1Q8IVP5 155 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 DENND6AQ8IWF6 608 aa11.4□□□□□ -0.58
USF1-201ENST00000368019 SLC15A3Q8IY34 581 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms