RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 NUDCD1Q96RS6 583 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 SLX1AQ9BQ83 275 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 RAB33BQ9H082 229 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 OSGEPL1Q9H4B0 414 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 RUBCNLQ9H714 662 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 CATSPERBQ9H7T0 1116 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF395Q9H8N7 513 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 PCMTD2Q9NV79 361 aa8.3□□□□□ -1.08
HMGB1P39-201ENST00000366304 GTPBP10A4D1E9 387 aaKnown RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 FIGNL2A6NMB9 653 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 BIN1O00499 593 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 CNOT3O75175 753 aaKnown RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 ALOX12BO75342 701 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 WISP2O76076 250 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 SMC2O95347 1197 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 CLDN7O95471 211 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 NADKO95544 446 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 KRT3P12035 628 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 SLC2A4P14672 509 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 ERCC2P18074 760 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 GPD1P21695 349 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 TDGF1P3P51864 188 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 BPIFB4P59827 614 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 RPL7AP62424 266 aaKnown RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 TUBB4BP68371 445 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 PDE1BQ01064 536 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 FMO1Q01740 532 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 TUBB2AQ13885 445 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 RFTN1Q14699 578 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 HENMT1Q5T8I9 393 aaKnown RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF385CQ66K41 422 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF324BQ6AW86 544 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 CYP4V2Q6ZWL3 525 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 ADGRG6Q86SQ4 1221 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 PHYKPLQ8IUZ5 450 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 NXPE1Q8N323 547 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 TTC30BQ8N4P2 665 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZADH2Q8N4Q0 377 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 UBXN4Q92575 508 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 EID2BQ96D98 161 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 LRFN5Q96NI6 719 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 PEBP4Q96S96 227 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 MGME1Q9BQP7 344 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 TUBB2BQ9BVA1 445 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 OR2AG1Q9H205 316 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 SP110Q9HB58 689 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 LATS2Q9NRM7 1088 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 AGPAT4Q9NRZ5 378 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 KCND1Q9NSA2 647 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 ETNK2Q9NVF9 386 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 TRIM10Q9UDY6 481 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 G3BP2Q9UN86 482 aaKnown RBP8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 DNAJC16Q9Y2G8 782 aa8.29□□□□□ -1.08
HMGB1P39-201ENST00000366304 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 A0A0J9YYE9 177 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 A0A1B0GUH1 482 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 EEF2KO00418 725 aaKnown RBP8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 CHUKO15111 745 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 PRLP01236 227 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 TRBC1P01850 177 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 ARCN1P48444 511 aaKnown RBP8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZNF143P52747 638 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 RRADP55042 308 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 ACY1Q03154 408 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 STIM1Q13586 685 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 NCF4Q15080 339 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 ARMC12Q5T9G4 340 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 PLEKHA7Q6IQ23 1121 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 ABRAXAS1Q6UWZ7 409 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 RFX8Q6ZV50 586 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 USP45Q70EL2 814 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 PPP1R32Q7Z5V6 425 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 C11orf96Q7Z7L8 435 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 MRGPRGQ86SM5 289 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 TRIM48Q8IWZ4 208 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 SYTL1Q8IYJ3 562 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 OR1L3Q8NH93 324 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 INSM2Q96T92 566 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 NRTNQ99748 197 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 WDR77Q9BQA1 342 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 CARD9Q9H257 536 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 GSX1Q9H4S2 264 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 RMI1Q9H9A7 625 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 TMPRSS11EQ9UL52 423 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 NEU2Q9Y3R4 380 aa8.28□□□□□ -1.08
HMGB1P39-201ENST00000366304 ZGRF1Q86YA3 2104 aa8.27□□□□□ -1.08
HMGB1P39-201ENST00000366304 A0A1W2PQJ5 194 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 BICDL2A1A5D9 508 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 PDZK1P1A8MUH7 402 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 F8VZ95 297 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 PCDH17O14917 1159 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 MAFKO60675 156 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 MTX2O75431 263 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 JRKO75564 520 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF7P17097 686 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 TSFMP43897 325 aaKnown RBP8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 SPINT3P49223 89 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 RENBPP51606 427 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 SOX8P57073 446 aa8.27□□□□□ -1.09
HMGB1P39-201ENST00000366304 GSDMDP57764 484 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms