RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DMWDQ09019 674 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 SLC29A2Q14542 456 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 GRAMD1BQ3KR37 738 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 NRN1LQ496H8 165 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TDRD12Q587J7 1177 aaKnown RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 OLFML1Q6UWY5 402 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TMEM108Q6UXF1 575 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 MON1BQ7L1V2 547 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 RSRC2Q7L4I2 434 aaKnown RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 WDR5BQ86VZ2 330 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 PHF13Q86YI8 300 aaPredicted RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 ADGRG5Q8IZF4 528 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TERB1Q8NA31 727 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 RPLP0P6Q8NHW5 317 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 ZNF566Q969W8 418 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 AZIN2Q96A70 460 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 PDLIM2Q96JY6 352 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TRIM62Q9BVG3 475 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 BBS2Q9BXC9 721 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 GALNT9Q9HCQ5 603 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TMEM74BQ9NUR3 256 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 DEC1Q9P2X7 70 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 AGO1Q9UL18 857 aaKnown RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 MMP17Q9ULZ9 603 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 SLC27A6Q9Y2P4 619 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 TSC22D4Q9Y3Q8 395 aa7.94□□□□□ -1.14
YBX3-204ENST00000366290 BZW2Q9Y6E2 419 aaKnown RBP7.94□□□□□ -1.14
YBX3-204ENST00000366290 CKAP5Q14008 2032 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 PI4KAP42356 2102 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 NEDD8-MDP1E9PL57 170 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 RAB27BO00194 218 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 AREL1O15033 823 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 APBB3O95704 486 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 IGLV3-25P01717 112 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 TPM1P09493 284 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 GZMAP12544 262 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 HOXC13P31276 330 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 HARS2P49590 506 aaKnown RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 DGKEP52429 567 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 GSCP56915 257 aaPredicted RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 EIF4EBP2Q13542 120 aaPredicted RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 DMC1Q14565 340 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 HLXQ14774 488 aaPredicted RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 KRT72Q14CN4 511 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 TAF5Q15542 800 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 INSCQ1MX18 579 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 ZIK1Q3SY52 487 aaPredicted RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 LAIR1Q6GTX8 287 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 ACAD10Q6JQN1 1059 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 TRNP1Q6NT89 227 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 MMS22LQ6ZRQ5 1243 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 FAM183BPQ6ZVS7 135 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 TRMT11Q7Z4G4 463 aaKnown RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 ERICH1Q86X53 443 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 SFTPA1Q8IWL2 248 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 IL17RCQ8NAC3 791 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 CPEB3Q8NE35 698 aaKnown RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 RNF139Q8WU17 664 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 SNX19Q92543 992 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 C18orf8Q96DM3 657 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 LRRC46Q96FV0 321 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 XPO6Q96QU8 1125 aaKnown RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 PANX2Q96RD6 677 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 C11orf70Q9BRQ4 267 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 SLC2A11Q9BYW1 496 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 MIS12Q9H081 205 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 ISCUQ9H1K1 167 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 PDCL3Q9H2J4 239 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 NHEJ1Q9H9Q4 299 aaPredicted RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 ASNSD1Q9NWL6 643 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 RASAL2Q9UJF2 1139 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 SLC8A2Q9UPR5 921 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 MAN2B2Q9Y2E5 1009 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 CACNA1EQ15878 2313 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 MAP1BP46821 2468 aaKnown RBP7.93□□□□□ -1.14
YBX3-204ENST00000366290 LAMA1P25391 3075 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 NUP205Q92621 2012 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 USP24Q9UPU5 2620 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 CHD6Q8TD26 2715 aa7.93□□□□□ -1.14
YBX3-204ENST00000366290 TBC1D3BA6NDS4 549 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 TMCO5BA8MYB1 307 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 NPC1O15118 1278 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 IRAK2O43187 625 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 CCP110O43303 1012 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 LRP3O75074 770 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 TCEA3O75764 348 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 INMTO95050 263 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 BTF3P20290 206 aaKnown RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 VAV2P52735 878 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 SNX16P57768 344 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 YWHAZP63104 245 aaKnown RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 PITX1P78337 314 aaPredicted RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 GFPT1Q06210 699 aaPredicted RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 ENPP2Q13822 863 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 ARHGEF7Q14155 803 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 SLC18A3Q16572 532 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 EOGTQ5NDL2 527 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 MPP7Q5T2T1 576 aa7.92□□□□□ -1.14
YBX3-204ENST00000366290 OTUD1Q5VV17 481 aaPredicted RBP7.92□□□□□ -1.14
YBX3-204ENST00000366290 NUGGCQ68CJ6 796 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms