RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 IGSF8Q969P0 613 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 PRICKLE1Q96MT3 831 aaPredicted RBP5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 ALG8Q9BVK2 526 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 MIS12Q9H081 205 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 SARS2Q9NP81 518 aaKnown RBP5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 CNGB3Q9NQW8 809 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 ABCC13Q9NSE7 274 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 SERGEFQ9UGK8 458 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 ZNF180Q9UJW8 692 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 STOML2Q9UJZ1 356 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 BPTFQ12830 3046 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 MYLKQ15746 1914 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 ZFYVE26Q68DK2 2539 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 DOCK9Q9BZ29 2069 aa5.32□□□□□ -1.56
RNU4-4P-201ENST00000364588 CELSR3Q9NYQ7 3312 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SHROOM3Q8TF72 1996 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ATRXP46100 2492 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 TRIM49BA6NDI0 452 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 TTC34A8MYJ7 566 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 M0QYG6 137 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 MGST3O14880 152 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 MID1O15344 667 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ACSL4O60488 711 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 RNASEH2AO75792 299 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 URI1O94763 535 aaPredicted RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 LATS1O95835 1130 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 MOCS2O96007 188 aaPredicted RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 IGLV3-27P01718 113 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 WNT1P04628 370 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 IGHV4-34P06331 123 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SETSIPP0DME0 302 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 PIM1P11309 404 aaPredicted RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 CSKP41240 450 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 GRIA3P42263 894 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 PSMD8P48556 350 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SLC11A2P49281 568 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 MAPK10P53779 464 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 GALCP54803 685 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 C21orf59P57076 290 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBX4P57082 545 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ST8SIA6P61647 398 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 YWHAEP62258 255 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 NKX6-1P78426 367 aaPredicted RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ZBTB16Q05516 673 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 DNAJC3Q13217 504 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 CDH18Q13634 790 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 KCNJ12Q14500 433 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 CST6Q15828 149 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 HNRNPA1L2Q32P51 320 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 FSCBQ5H9T9 825 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 NUGGCQ68CJ6 796 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ANKRD40Q6AI12 368 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 NCEH1Q6PIU2 408 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 LCLAT1Q6UWP7 414 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 PEG10Q86TG7 708 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 PPP1R3BQ86XI6 285 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 MMAAQ8IVH4 418 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 UNC45BQ8IWX7 931 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 GALNT15Q8N3T1 639 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SH2D3CQ8N5H7 860 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 HJURPQ8NCD3 748 aaPredicted RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 DQX1Q8TE96 717 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SLC35F5Q8WV83 523 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 GOLGA1Q92805 767 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 FAM149B1Q96BN6 582 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 PBKQ96KB5 322 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 LMLNQ96KR4 655 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 TSG101Q99816 390 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 OMDQ99983 421 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SPATA5L1Q9BVQ7 753 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 RSPH9Q9H1X1 276 aaPredicted RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 NEUROG2Q9H2A3 272 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 PABPC3Q9H361 631 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 PRDM13Q9H4Q3 707 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 EBF2Q9HAK2 575 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SGK2Q9HBY8 427 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 FBXL12Q9NXK8 326 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ARMCX3Q9UH62 379 aaPredicted RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 SUN2Q9UH99 717 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 XPO7Q9UIA9 1087 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 INTS6Q9UL03 887 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ERVW-1Q9UQF0 538 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 NCKAP1Q9Y2A7 1128 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 COQ4Q9Y3A0 265 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 CEP83Q9Y592 693 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ENTPD2Q9Y5L3 495 aa5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 URB1O60287 2271 aaKnown RBP5.31□□□□□ -1.56
RNU4-4P-201ENST00000364588 ACACAQ13085 2346 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 COL5A1P20908 1838 aaPredicted RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 LAMA5O15230 3695 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 A0A1B0GTQ1 180 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 A0A1W2PPC4 97 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 TYW5A2RUC4 315 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 PRSS29PA6NIE9 313 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 LRRC72A6NJI9 287 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 F5H697 171 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 H3BML4 177 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 PLK4O00444 970 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 VILLO15195 856 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 SLC16A3O15427 465 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms