RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 ABI3BPQ7Z7G0 1075 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 DSG4Q86SJ6 1040 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ZSCAN30Q86W11 494 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ADGRG3Q86Y34 549 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CHERPQ8IWX8 916 aaKnown RBP4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ARFGAP1Q8N6T3 406 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 OR2AJ1Q8NGZ0 328 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 C16orf52Q8NHV5 167 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 BBS10Q8TAM1 723 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 MGARPQ8TDB4 240 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 UTP15Q8TED0 518 aaKnown RBP4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 WFIKKN2Q8TEU8 576 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 OIT3Q8WWZ8 545 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 SNX21Q969T3 373 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 SPDL1Q96EA4 605 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CHFRQ96EP1 664 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 PRMT6Q96LA8 375 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 MUS81Q96NY9 551 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 MMTAG2Q9BU76 263 aaKnown RBP4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 MMADHCQ9H3L0 296 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 TBC1D17Q9HA65 648 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ZBTB40Q9NUA8 1239 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CWC25Q9NXE8 425 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 RCC2Q9P258 522 aaKnown RBP4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 LIPT1Q9Y234 373 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 KLHL20Q9Y2M5 609 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 LOXL2Q9Y4K0 774 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 HS3ST3B1Q9Y662 390 aa4.48□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ATXN2Q99700 1313 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 A0A1W2PP11 408 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 TMEM221A6NGB7 291 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 VWA5AO00534 786 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 XRCC3O43542 346 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 MED24O75448 989 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CAMTA2O94983 1202 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CELA2AP08217 269 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 KELP23276 732 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 LMO1P25800 156 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CDC25CP30307 473 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 MTHFRP42898 656 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 GDF5P43026 501 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CRKLP46109 303 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 AMPHP49418 695 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ALDH3A2P51648 485 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 NAGLUP54802 743 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 UBXN1Q04323 297 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 TROAPQ12815 778 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 NR1D2Q14995 579 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 RBMS2Q15434 407 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CCDC92Q53HC0 331 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 RAB6CQ53S08 254 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 FAM69BQ5VUD6 431 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 OTUD1Q5VV17 481 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 FAM91A1Q658Y4 838 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 TYW3Q6IPR3 259 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 SHC4Q6S5L8 630 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 RAPH1Q70E73 1250 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 MEPCEQ7L2J0 689 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 DET1Q7L5Y6 550 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 TMEM199Q8N511 208 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 SLC5A8Q8N695 610 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ARL10Q8N8L6 244 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ZNF548Q8NEK5 533 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 OR5R1Q8NH85 324 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 OCC1Q8TAD7 63 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 GRAPLQ8TC17 118 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 SLC44A1Q8WWI5 657 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 ATL1Q8WXF7 558 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 PCYT2Q99447 389 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 CMKLR1Q99788 373 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 KATNB1Q9BVA0 655 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 SCAND2PQ9GZW5 306 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 RAB6CQ9H0N0 254 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 WNT5BQ9H1J7 359 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 NOX4Q9NPH5 578 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 NRIP3Q9NQ35 241 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 RHCGQ9UBD6 479 aa4.47□□□□□ -1.69
RNU6-1339P-201ENST00000363574 IGLV5-39A0A0G2JS06 123 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 OR2M5A3KFT3 312 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 GOLGA6L9A6NEM1 432 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 CYR61O00622 381 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 ASAP2O43150 1006 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 RGS14O43566 566 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 SPRY3O43610 288 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 CH25HO95992 272 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 RAB40ALP0C0E4 278 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 PRF1P14222 555 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 AZGP1P25311 298 aaKnown RBP4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 TKTP29401 623 aaKnown RBP4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 CLCNKAP51800 687 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 CRYZQ08257 329 aaKnown RBP4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 COASYQ13057 564 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 GPS2Q13227 327 aa4.46□□□□□ -1.7
RNU6-1339P-201ENST00000363574 RRS1Q15050 365 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms