RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 MRPL9Q9BYD2 267 aaKnown RBP18.83■□□□□ 0.61
CMTM3-201ENST00000361909 NDEL1Q9GZM8 345 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 HOXD1Q9GZZ0 328 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 ENTPD7Q9NQZ7 604 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 FAM118AQ9NWS6 357 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 SHROOM3Q8TF72 1996 aa18.83■□□□□ 0.61
CMTM3-201ENST00000361909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.83■□□□□ 0.6
CMTM3-201ENST00000361909 B4GALT3O60512 393 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 GEMP55040 296 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 GP2P55259 537 aaKnown RBP18.83■□□□□ 0.6
CMTM3-201ENST00000361909 TCTN1Q2MV58 587 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 UNC50Q53HI1 259 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 C6orf183Q5T699 404 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 ATAD3BQ5T9A4 648 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 PRR23CQ6ZRP0 262 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 LGI2Q8N0V4 545 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 NPWQ8N729 165 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 HASPINQ8TF76 798 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 PHF21BQ96EK2 531 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 TESMINQ9Y4I5 508 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 MYLKQ15746 1914 aa18.83■□□□□ 0.6
CMTM3-201ENST00000361909 CLDN5O00501 218 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 WISP3O95389 354 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 NADKO95544 446 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 NDST3O95803 873 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 IL7RP16871 459 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 CYP2C18P33260 490 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 GRIK1P39086 918 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 OR1G1P47890 313 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 ARPC4P59998 168 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 EMX2Q04743 252 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 DNASE1L3Q13609 305 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 POU6F1Q14863 301 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 ZNF181Q2M3W8 571 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 PGS1Q32NB8 556 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 ZIK1Q3SY52 487 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 EFL1Q7Z2Z2 1120 aaKnown RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 SLC22A16Q86VW1 577 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 SMARCD1Q96GM5 515 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 PKMYT1Q99640 499 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 TOR3AQ9H497 397 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 C11orf49Q9H6J7 331 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 CSNK1G1Q9HCP0 422 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 PIGVQ9NUD9 493 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 PAK1IP1Q9NWT1 392 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 ZNF229Q9UJW7 825 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 POU2F3Q9UKI9 436 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 PCDHGA8Q9Y5G5 932 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 GPR45Q9Y5Y3 372 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 ILVBLA1L0T0 632 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 CENPBD1B2RD01 187 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 PIP5K1BO14986 540 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 ASNA1O43681 348 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 SOAT2O75908 522 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 OAZ2O95190 189 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 JCHAINP01591 159 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 HOXB6P17509 224 aaKnown RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 HRH2P25021 359 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 PLK1P53350 603 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 YWHAHQ04917 246 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 ADIGQ0VDE8 80 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 KRR1Q13601 381 aaKnown RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 STK32CQ86UX6 486 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 SEPHS2Q99611 448 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 RBM4BQ9BQ04 359 aaKnown RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 RBM4Q9BWF3 364 aaKnown RBP18.82■□□□□ 0.6
CMTM3-201ENST00000361909 TMPRSS4Q9NRS4 437 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 TMEM39AQ9NV64 488 aa18.82■□□□□ 0.6
CMTM3-201ENST00000361909 SYN3O14994 580 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 MT-CO1P00395 513 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 CLTBP09497 229 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 HOXB8P17481 243 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-201ENST00000361909 TSPY1Q01534 308 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 SF3B4Q15427 424 aaKnown RBP eCLIP18.81■□□□□ 0.6
CMTM3-201ENST00000361909 DPY19L1Q2PZI1 675 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 CNKSR3Q6P9H4 555 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 IFNEQ86WN2 208 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 TMEM199Q8N511 208 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 DYNC2LI1Q8TCX1 351 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 PGAP3Q96FM1 320 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-201ENST00000361909 TMEM175Q9BSA9 504 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 COMMD8Q9NX08 183 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 SLC1A7O00341 560 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 MRPS14O60783 128 aaKnown RBP18.81■□□□□ 0.6
CMTM3-201ENST00000361909 BEST1O76090 585 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 HGFP14210 728 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 NCK1P16333 377 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 RYKP34925 604 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 EIF2DP41214 584 aaKnown RBP18.81■□□□□ 0.6
CMTM3-201ENST00000361909 CHRNB3Q05901 458 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 RFX4Q33E94 735 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 RABL3Q5HYI8 236 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 RBM20Q5T481 1227 aaKnown RBP18.81■□□□□ 0.6
CMTM3-201ENST00000361909 DENND5AQ6IQ26 1287 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 BEND5Q7L4P6 421 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 DSG4Q86SJ6 1040 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 SVOPQ8N4V2 548 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 LILRB4Q8NHJ6 448 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 RHOXF1Q8NHV9 184 aa18.81■□□□□ 0.6
CMTM3-201ENST00000361909 DNAJB14Q8TBM8 379 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms