RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SOD2P04179 222 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 PFKMP08237 780 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 FAM220AQ7Z4H9 259 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 AHI1Q8N157 1196 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 SLC35F5Q8WV83 523 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 CLN6Q9NWW5 311 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 STMN3Q9NZ72 180 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 SEC14L3Q9UDX4 400 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 CAPN1P07384 714 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 CCR3P51677 355 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 LAPTM5Q13571 262 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 TTC23Q5W5X9 447 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 SULT1C3Q6IMI6 304 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 NIPA2Q8N8Q9 360 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 MOSPD2Q8NHP6 518 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 SLC47A1Q96FL8 570 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 ADGRE2Q9UHX3 823 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 HAPLN1P10915 354 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 PTGIRP43119 386 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 ASMTP46597 345 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 HADHBP55084 474 aaKnown RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 EPS8Q12929 822 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 VPS26BQ4G0F5 336 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 TRAF7Q6Q0C0 670 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 SNX20Q7Z614 316 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 SPOCK2Q92563 424 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 C8orf48Q96LL4 319 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 GAL3ST4Q96RP7 486 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 OSBPL2Q9H1P3 480 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 COX10Q12887 443 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 FAM171BQ6P995 826 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 DNAJC28Q9NX36 388 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 OGDHLQ9ULD0 1010 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 ITGAXP20702 1163 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 DDX6P26196 483 aaKnown RBP eCLIP18.37■□□□□ 0.537e-8■■■■■ 33.3
CLIP2-202ENST00000361545 TPP2P29144 1249 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 FSTL5Q8N475 847 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 CYP4B1P13584 511 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 TYRP14679 529 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 OGNP20774 298 aaKnown RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 IGFALSP35858 605 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 MASP1P48740 699 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 ST13P50502 369 aaKnown RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 KLF10Q13118 480 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 PDZK1Q5T2W1 519 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 RSBN1Q5VWQ0 802 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 ARMCX6Q7L4S7 300 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 TTC29Q8NA56 475 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 RBM18Q96H35 190 aaKnown RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 NFKBIL1Q9UBC1 381 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF180Q9UJW8 692 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 CORO1CQ9ULV4 474 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-202ENST00000361545 PCDHGB3Q9Y5G1 929 aa18.37■□□□□ 0.53
CLIP2-202ENST00000361545 C8GP07360 202 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 CYP4F3Q08477 520 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 ARMC4Q5T2S8 1044 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 TRIQKQ629K1 86 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF57Q68EA5 555 aaPredicted RBP18.36■□□□□ 0.53
CLIP2-202ENST00000361545 ULK2Q8IYT8 1036 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 ATP6V1C2Q8NEY4 427 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 TEX47Q8TBZ9 253 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 IGSF21Q96ID5 467 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 HSD3B7Q9H2F3 369 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 EIF2B3Q9NR50 452 aaKnown RBP18.36■□□□□ 0.53
CLIP2-202ENST00000361545 SIX4Q9UIU6 781 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 TMEM63AO94886 807 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 EFNA1P20827 205 aaPredicted RBP18.36■□□□□ 0.53
CLIP2-202ENST00000361545 GRIA1P42261 906 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 HSPB3Q12988 150 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 KIAA0930Q6ICG6 404 aaPredicted RBP18.36■□□□□ 0.53
CLIP2-202ENST00000361545 OR2AP1Q8NGE2 309 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 RPRD1BQ9NQG5 326 aaKnown RBP18.36■□□□□ 0.53
CLIP2-202ENST00000361545 GALTP07902 379 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 BEND5Q7L4P6 421 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 LYSMD3Q7Z3D4 306 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 NMUR2Q9GZQ4 415 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 RNPEPL1Q9HAU8 725 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 B4DGG1 531 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 ALDH4A1P30038 563 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 RALGDSQ12967 914 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 SMOC2Q9H3U7 446 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 C11orf88Q6PI97 169 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 IZUMO1Q8IYV9 350 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 PLEKHO2Q8TD55 490 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 C5orf34Q96MH7 638 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 LRMDAQ9H2I8 198 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 ARL8BQ9NVJ2 186 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 FBXL12Q9NXK8 326 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 SLC17A6Q9P2U8 582 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 GMEB2Q9UKD1 530 aa18.36■□□□□ 0.53
CLIP2-202ENST00000361545 A0A087WXM4 84 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 CPED1A4D0V7 1026 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 F7P08709 466 aaPredicted RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 UROSP10746 265 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 TCEA1P23193 301 aaKnown RBP18.35■□□□□ 0.53
CLIP2-202ENST00000361545 ANKRD46Q86W74 232 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 MPP5Q8N3R9 675 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 PMEPA1Q969W9 287 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 CNPPD1Q9BV87 410 aa18.35■□□□□ 0.53
CLIP2-202ENST00000361545 CRTAC1Q9NQ79 661 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms