RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 DOLKQ9UPQ8 538 aa13.61□□□□□ -0.23
NSMCE1-201ENST00000361439 PLXNB3Q9ULL4 1909 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 FAM159BA6NKW6 160 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 OR5K4A6NMS3 321 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 LIN7AO14910 233 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 YY2O15391 372 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 CD59P13987 128 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 CD9P21926 228 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 SSTR1P30872 391 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 CTBP1Q13363 440 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 KYNUQ16719 465 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 C6orf132Q5T0Z8 1188 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 AGAP9Q5VTM2 703 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 ZCCHC8Q6NZY4 707 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 OGFOD3Q6PK18 319 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 CRTC3Q6UUV7 619 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 NRROSQ86YC3 692 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 DENND6AQ8IWF6 608 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 KIAA2013Q8IYS2 634 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 UNC5BQ8IZJ1 945 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 CLDN19Q8N6F1 224 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 AVL9Q8NBF6 648 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 OR2I1PQ8NGU4 316 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 HM13Q8TCT9 377 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 GLMNQ92990 594 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 BIRC8Q96P09 236 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 CCDC68Q9H2F9 335 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 CDC42EP4Q9H3Q1 356 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 KLC4Q9NSK0 619 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 EVA1BQ9NVM1 165 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 UCKL1Q9NWZ5 548 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 NINJ2Q9NZG7 142 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 IL1RAPL1Q9NZN1 696 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 TAAR2Q9P1P5 351 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 LRP4O75096 1905 aa13.6□□□□□ -0.23
NSMCE1-201ENST00000361439 UBA6A0AVT1 1052 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 GDF9O60383 454 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 SDC3O75056 442 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 ABHD2P08910 425 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 GIMD1P0DJR0 217 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 ACP5P13686 325 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 IDSP22304 550 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 ACTR1BP42025 376 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 ACTR1AP61163 376 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 IL9RQ01113 521 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 ZNF658BQ4V348 819 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 METRNLQ641Q3 311 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 PTRHD1Q6GMV3 140 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 EMBQ6PCB8 327 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 DET1Q7L5Y6 550 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 PIP4P1Q86T03 277 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 LDB1Q86U70 411 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 OR6C4Q8NGE1 309 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 KCNJ9Q92806 393 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 CYTH2Q99418 400 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 CDC6Q99741 560 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 CPNE1Q99829 537 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 LATS2Q9NRM7 1088 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 RAB21Q9UL25 225 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 PRKAB1Q9Y478 270 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 PCYT1BQ9Y5K3 369 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 PRSS21Q9Y6M0 314 aa13.59□□□□□ -0.23
NSMCE1-201ENST00000361439 TP53BP1Q12888 1972 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 DNAH14Q0VDD8 3507 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 SLC30A4O14863 429 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 HAUS5O94927 633 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 C1QAP02745 245 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 AHSGP02765 367 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 MYBL2P10244 700 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 F3P13726 295 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 PKMP14618 531 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 SKIV2L2P42285 1042 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 CD151P48509 253 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 RPIAP49247 311 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 DUSP3P51452 185 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 PMS2P54278 862 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 CSE1LP55060 971 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 EIF3BP55884 814 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 VSNL1P62760 191 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 C1orf61Q13536 156 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 UAP1L1Q3KQV9 507 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 ABRAXAS1Q6UWZ7 409 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 GATAD2AQ86YP4 633 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 NAXDQ8IW45 347 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 ARL10Q8N8L6 244 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 FAM46DQ8NEK8 389 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 CCL4L1Q8NHW4 92 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 RHBDD1Q8TEB9 315 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 FBF1Q8TES7 1133 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 ASZ1Q8WWH4 475 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 CCDC97Q96F63 343 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 PARD6BQ9BYG5 372 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 DPEP2Q9H4A9 486 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 ACSS3Q9H6R3 686 aa13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 RRAGDQ9NQL2 400 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 FBXO6Q9NRD1 293 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-201ENST00000361439 SPATS2LQ9NUQ6 558 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms