RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NATD1Q8N6N6 113 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 PIK3C3Q8NEB9 887 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 TEX47Q8TBZ9 253 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SLC38A3Q99624 504 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 SRMSQ9H3Y6 488 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 LYVE1Q9Y5Y7 322 aa13.33□□□□□ -0.28
LDB3-202ENST00000361373 GALTP07902 379 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 MTHFRP42898 656 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 SPIBQ01892 262 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 SRSF11Q05519 484 aaKnown RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 GALNT2Q10471 571 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 XKR4Q5GH76 650 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 PPM1JQ5JR12 505 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 FSTL5Q8N475 847 aaPredicted RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 NAT8LQ8N9F0 302 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 B3GALT6Q96L58 329 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 GATA5Q9BWX5 397 aaPredicted RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 WDR55Q9H6Y2 383 aaPredicted RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 ZSCAN32Q9NX65 697 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 AJAP1Q9UKB5 411 aaPredicted RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 EFCAB10A6NFE3 127 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 METTL18O95568 372 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 HLA-DQB2P05538 268 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 HNRNPA1P09651 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
LDB3-202ENST00000361373 IL1R2P27930 398 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 SEC13P55735 322 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 USP46P62068 366 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 CYP4F2P78329 520 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 TCEAL1Q15170 157 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 BROXQ5VW32 411 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 SLC9A4Q6AI14 798 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 CLNKQ7Z7G1 428 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 DCAKDQ8WVC6 231 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 TRIB2Q92519 343 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 PPP1R14AQ96A00 147 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 C1orf74Q96LT6 269 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 CEP295NLQ96MC4 621 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 EFCAB11Q9BUY7 163 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 ABCG8Q9H221 673 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 ERGIC3Q9Y282 383 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 CCDC162PA2VCL2 907 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 PRR5P85299 388 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 BNC1Q01954 994 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 RING1Q06587 406 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 EPOP01588 193 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 GDF10P55107 478 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 NEDD8Q15843 81 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 SPANXN2Q5MJ10 180 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 ZNF776Q68DI1 518 aaPredicted RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 CHST15Q7LFX5 561 aaPredicted RBP13.32□□□□□ -0.28
LDB3-202ENST00000361373 HID1Q8IV36 788 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 C11orf65Q8NCR3 313 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 C1orf109Q9NX04 203 aa13.32□□□□□ -0.28
LDB3-202ENST00000361373 K7EPI3 171 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 INPPL1O15357 1258 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 VIPR1P32241 457 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 SLC1A2P43004 574 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 INAVAQ3KP66 663 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 TRIQKQ629K1 86 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 FAAH2Q6GMR7 532 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 RIT1Q92963 219 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 ROPN1LQ96C74 230 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 TLCD1Q96CP7 247 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 CDKN2AIPNLQ96HQ2 116 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 ZMAT2Q96NC0 199 aaKnown RBP13.31□□□□□ -0.28
LDB3-202ENST00000361373 TMEM248Q9NWD8 314 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 SEC14L3Q9UDX4 400 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 KDELR3O43731 214 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 CBSLP0DN79 551 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 CBSP35520 551 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 NUP62P37198 522 aaPredicted RBP13.31□□□□□ -0.28
LDB3-202ENST00000361373 SLC10A7Q0GE19 358 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 TRAF3Q13114 568 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 MTX3Q5HYI7 312 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 ARMC4Q5T2S8 1044 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 GCNT6Q5T4J0 391 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 PGAM4Q8N0Y7 254 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 ZCCHC7Q8N3Z6 543 aaKnown RBP13.31□□□□□ -0.28
LDB3-202ENST00000361373 SMYD1Q8NB12 490 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 USP29Q9HBJ7 922 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 IL6P05231 212 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 ANPEPP15144 967 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 ACTR3P61158 418 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 MYLK3Q32MK0 819 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 SNAP47Q5SQN1 464 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 PDZK1Q5T2W1 519 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 NAIF1Q69YI7 327 aaPredicted RBP13.31□□□□□ -0.28
LDB3-202ENST00000361373 RNF44Q7L0R7 432 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 ADGRE2Q9UHX3 823 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 H7C0S8 307 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 OR1F1O43749 312 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 IGFALSP35858 605 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 TAS2R41P59536 307 aa13.31□□□□□ -0.28
LDB3-202ENST00000361373 LRRC32Q14392 662 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms