RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 CLPXO76031 633 aa16■□□□□ 0.15
IFT140-201ENST00000361339 PCNAP12004 261 aa16■□□□□ 0.15
IFT140-201ENST00000361339 HPCAL1P37235 193 aa16■□□□□ 0.15
IFT140-201ENST00000361339 TSNQ15631 228 aaKnown RBP16■□□□□ 0.15
IFT140-201ENST00000361339 UGT3A1Q6NUS8 523 aa16■□□□□ 0.15
IFT140-201ENST00000361339 FAM117BQ6P1L5 589 aa16■□□□□ 0.15
IFT140-201ENST00000361339 FUT10Q6P4F1 479 aa16■□□□□ 0.15
IFT140-201ENST00000361339 EFHBQ8N7U6 833 aa16■□□□□ 0.15
IFT140-201ENST00000361339 PSD4Q8NDX1 1056 aa16■□□□□ 0.15
IFT140-201ENST00000361339 OR4L1Q8NH43 312 aa16■□□□□ 0.15
IFT140-201ENST00000361339 TRUB1Q8WWH5 349 aaKnown RBP16■□□□□ 0.15
IFT140-201ENST00000361339 MUS81Q96NY9 551 aa16■□□□□ 0.15
IFT140-201ENST00000361339 CASD1Q96PB1 797 aa16■□□□□ 0.15
IFT140-201ENST00000361339 C1orf50Q9BV19 199 aa16■□□□□ 0.15
IFT140-201ENST00000361339 MIR1-1HGQ9H1L0 117 aa16■□□□□ 0.15
IFT140-201ENST00000361339 CATSPERZQ9NTU4 200 aa16■□□□□ 0.15
IFT140-201ENST00000361339 RIC8BQ9NVN3 520 aa16■□□□□ 0.15
IFT140-201ENST00000361339 EVLQ9UI08 416 aaPredicted RBP16■□□□□ 0.15
IFT140-201ENST00000361339 ZNF229Q9UJW7 825 aa16■□□□□ 0.15
IFT140-201ENST00000361339 PTGES3LE9PB15 166 aa16■□□□□ 0.15
IFT140-201ENST00000361339 CBX4O00257 560 aa16■□□□□ 0.15
IFT140-201ENST00000361339 PAPSS2O95340 614 aaPredicted RBP16■□□□□ 0.15
IFT140-201ENST00000361339 IL7RP16871 459 aa16■□□□□ 0.15
IFT140-201ENST00000361339 PPP1R8Q12972 351 aaKnown RBP16■□□□□ 0.15
IFT140-201ENST00000361339 HERC3Q15034 1050 aa16■□□□□ 0.15
IFT140-201ENST00000361339 SAMD4BQ5PRF9 694 aaKnown RBP16■□□□□ 0.15
IFT140-201ENST00000361339 PSAPL1Q6NUJ1 521 aa16■□□□□ 0.15
IFT140-201ENST00000361339 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
IFT140-201ENST00000361339 ABHD11Q8NFV4 315 aa16■□□□□ 0.15
IFT140-201ENST00000361339 DNAJB14Q8TBM8 379 aa16■□□□□ 0.15
IFT140-201ENST00000361339 HTRA1Q92743 480 aa16■□□□□ 0.15
IFT140-201ENST00000361339 TSPAN17Q96FV3 270 aa16■□□□□ 0.15
IFT140-201ENST00000361339 ALPK1Q96QP1 1244 aa16■□□□□ 0.15
IFT140-201ENST00000361339 HBEGFQ99075 208 aa16■□□□□ 0.15
IFT140-201ENST00000361339 RAD21L1Q9H4I0 556 aa16■□□□□ 0.15
IFT140-201ENST00000361339 EXD2Q9NVH0 621 aa16■□□□□ 0.15
IFT140-201ENST00000361339 SMPD4Q9NXE4 827 aa16■□□□□ 0.15
IFT140-201ENST00000361339 GOLGA8CPA6NN73 597 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 RPP40O75818 363 aaKnown RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 PRLP01236 227 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 GFAPP14136 432 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 NR4A2P43354 598 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 KPNA2P52292 529 aaKnown RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 HERVK_113P63132 956 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 NKX3-2P78367 333 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 RFTN1Q14699 578 aaPredicted RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 SLC36A3Q495N2 470 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 RNF180Q86T96 592 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 ANKFN1Q8N957 763 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 LPCAT1Q8NF37 534 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TRIB3Q96RU7 358 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 ERVK-6Q9BXR3 956 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 NACA2Q9H009 215 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 WDR70Q9NW82 654 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 UTP6Q9NYH9 597 aaKnown RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 USP22Q9UPT9 525 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 THSD7BQ9C0I4 1608 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 NPEPPSL1A6NEC2 478 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 SLC38A8A6NNN8 435 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 F5H5T6 163 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TMEM189-UBE2V1I3L0A0 370 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 NIPSNAP2O75323 286 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 GSSP48637 474 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 DIO3P55073 304 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TPD52P55327 224 aaPredicted RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 C18orf21Q32NC0 220 aaPredicted RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 FAM45BPQ6NSW5 357 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TBPL2Q6SJ96 375 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 FAM45AQ8TCE6 357 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TEX37Q96LM6 180 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 ATP11BQ9Y2G3 1177 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 A0A1W2PQ45 241 aaPredicted RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 A0A1W2PQY0 241 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 SUPT3HB4E1H0 165 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 H3BNC9 293 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 RHOBTB1O94844 696 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 BMP2P12643 396 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 CAPN3P20807 821 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 PSMA4P25789 261 aaKnown RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 IFITM3Q01628 133 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 OCA2Q04671 838 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 SREBF2Q12772 1141 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 SQLEQ14534 574 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 PARP15Q460N3 678 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TIGD2Q4W5G0 525 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 PAGE2BQ5JRK9 111 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TMCO2Q7Z6W1 182 aaPredicted RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 PCYOX1LQ8NBM8 494 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 TWIST2Q8WVJ9 160 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 SCLYQ96I15 445 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 ATOH8Q96SQ7 321 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 ACOX2Q99424 681 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 GPR21Q99679 349 aa15.99■□□□□ 0.15
IFT140-201ENST00000361339 EML4Q9HC35 981 aaKnown RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 TUBA8Q9NY65 449 aaPredicted RBP15.99■□□□□ 0.15
IFT140-201ENST00000361339 H0YJX3 145 aa15.98■□□□□ 0.15
IFT140-201ENST00000361339 NME4O00746 187 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms