RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CPN2P22792 545 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 CARD16Q5EG05 197 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 GRHL3Q8TE85 626 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 RIOK2Q9BVS4 552 aaKnown RBP20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 TCRBV21S2A2A0A5A6 115 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 MYL9P24844 172 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 CACNA2D1P54289 1103 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 ATP6V0D1P61421 351 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 TRPV3Q8NET8 790 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 MTERF1Q99551 399 aaKnown RBP20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 ZNF222Q9UK12 451 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 AK5Q9Y6K8 562 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 NCANO14594 1321 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 PYCR2Q96C36 320 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 TCRBV7S2A1N4TA0A589 114 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 PDE9AO76083 593 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 LAMP2P13473 410 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 TTMPQ5BVD1 217 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 MTX3Q5HYI7 312 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 FRRS1Q6ZNA5 592 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 PEX5LQ8IYB4 626 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 CMTM8Q8IZV2 173 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 TXNRD2Q9NNW7 524 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 YIPF1Q9Y548 306 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 HOXB8P17481 243 aaPredicted RBP20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 FASTKD3Q14CZ7 662 aaKnown RBP20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 VWA5B1Q5TIE3 1220 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 GDPD4Q6W3E5 623 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 SLC22A15Q8IZD6 547 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 OR4E2Q8NGC2 313 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 CEP295NLQ96MC4 621 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 CEP44Q9C0F1 390 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 LHX5Q9H2C1 402 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 FZD10Q9ULW2 581 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 R3HDM2Q9Y2K5 976 aaKnown RBP20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 LTN1O94822 1766 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 HCN1O60741 890 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 GDI2P50395 445 aaKnown RBP20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 LARS2Q15031 903 aaKnown RBP20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 GPR151Q8TDV0 419 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 TWIST2Q8WVJ9 160 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 GGA2Q9UJY4 613 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 PCDHB1Q9Y5F3 818 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 PPEF2O14830 753 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 BLKP51451 505 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 SLC34A1Q06495 639 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 IRF2BP2Q7Z5L9 587 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 HCAR2Q8TDS4 363 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 KCNK4Q9NYG8 393 aa20.07■□□□□ 0.8
CDC42BPB-201ENST00000361246 TNFRSF10BO14763 440 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 RGS20O76081 388 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 AGXTP21549 392 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 PAX3P23760 479 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 PSMD4P55036 377 aaKnown RBP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 LGALS3BPQ08380 585 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 CARTPTQ16568 116 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 RBCK1Q9BYM8 510 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 ECDO95905 644 aaPredicted RBP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 TGFB1P01137 390 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 GALK1P51570 392 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 TNK2Q07912 1038 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 KCTD21Q4G0X4 260 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 PTCD2Q8WV60 388 aaKnown RBP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 FAM192AQ9GZU8 254 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 NKX2-4Q9H2Z4 354 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 CLCA3PQ9Y6N3 262 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 WWP2O00308 870 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 MED26O95402 600 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 JMJD7P0C870 316 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 BMP6P22004 513 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 POTEHQ6S545 545 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 SPPL2CQ8IUH8 684 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 CLIP4Q8N3C7 705 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 PDP2Q9P2J9 529 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 ADGRB1O14514 1584 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 TRAFD1O14545 582 aaPredicted RBP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 NDUFS4O43181 175 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 CCNOP22674 350 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 CHAF1BQ13112 559 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 PDGFRLQ15198 375 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 SLC34A3Q8N130 599 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 ZCCHC7Q8N3Z6 543 aaKnown RBP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 FAM13CQ8NE31 585 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 FNIP1Q8TF40 1166 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 C11orf16Q9NQ32 467 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 RGS17Q9UGC6 210 aaPredicted RBP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 RAP2CQ9Y3L5 183 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 CLUHO75153 1309 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 C15orf38-AP3S2A0A0A6YYH1 394 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 ARPINQ7Z6K5 226 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 MSL3Q8N5Y2 521 aaKnown RBP20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 ARHGAP39Q9C0H5 1083 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 PRDM16Q9HAZ2 1276 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 MED31Q9Y3C7 131 aa20.06■□□□□ 0.8
CDC42BPB-201ENST00000361246 SNAP91O60641 907 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 KCNQ1P51787 676 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CRYBG2Q8N1P7 616 aa20.05■□□□□ 0.8
CDC42BPB-201ENST00000361246 CHST4Q8NCG5 386 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms