RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 RBM38Q9H0Z9 239 aaKnown RBP22.33■■□□□ 1.16
LDB1-201ENST00000361198 CD274Q9NZQ7 290 aa22.33■■□□□ 1.16
LDB1-201ENST00000361198 POLG2Q9UHN1 485 aa22.33■■□□□ 1.16
LDB1-201ENST00000361198 TSR3Q9UJK0 312 aaKnown RBP22.33■■□□□ 1.16
LDB1-201ENST00000361198 CROTQ9UKG9 612 aa22.33■■□□□ 1.16
LDB1-201ENST00000361198 PCDHB1Q9Y5F3 818 aa22.33■■□□□ 1.16
LDB1-201ENST00000361198 SRCP12931 536 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 GJA8P48165 433 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 NFATC2Q13469 925 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 KIF19Q2TAC6 998 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 NADK2Q4G0N4 442 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 C6orf10Q5SRN2 563 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 SYVN1Q86TM6 617 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 CHERPQ8IWX8 916 aaKnown RBP22.32■■□□□ 1.16
LDB1-201ENST00000361198 ZNF784Q8NCA9 323 aaPredicted RBP22.32■■□□□ 1.16
LDB1-201ENST00000361198 TUBGCP3Q96CW5 907 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 LMLNQ96KR4 655 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 PLEKHG4BQ96PX9 1271 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 APPL1Q9UKG1 709 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 C7orf72A4D263 438 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 SNX2O60749 519 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 ZNF7P17097 686 aaPredicted RBP22.32■■□□□ 1.16
LDB1-201ENST00000361198 BPIP17213 487 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 UGT1A6P19224 532 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 UGT1A1P22309 533 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 UGT1A4P22310 534 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 UGT1A3P35503 534 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 UGT1A5P35504 534 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 NME5P56597 212 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 ERVFC1P60507 584 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 TXNL4AP83876 142 aaKnown RBP22.32■■□□□ 1.16
LDB1-201ENST00000361198 RALGDSQ12967 914 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 PTRHD1Q6GMV3 140 aaKnown RBP22.32■■□□□ 1.16
LDB1-201ENST00000361198 SNX20Q7Z614 316 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 HGH1Q9BTY7 390 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 CLPBQ9H078 707 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 PTTG2Q9NZH5 202 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 PRSS21Q9Y6M0 314 aa22.32■■□□□ 1.16
LDB1-201ENST00000361198 PIKFYVEQ9Y2I7 2098 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 CRCPO75575 148 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 SEMG2Q02383 582 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 PITRM1Q5JRX3 1037 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 IYDQ6PHW0 289 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 TSPAN33Q86UF1 283 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 CLDN19Q8N6F1 224 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 LRTOMTQ8WZ04 291 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 ROPN1LQ96C74 230 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 PRPF18Q99633 342 aaKnown RBP22.31■■□□□ 1.16
LDB1-201ENST00000361198 C17orf80Q9BSJ5 609 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 COQ10BQ9H8M1 238 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 TLR9Q9NR96 1032 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 EIF2B4Q9UI10 523 aaKnown RBP22.31■■□□□ 1.16
LDB1-201ENST00000361198 HIDE1A8MVS5 230 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 E2F3O00716 465 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 BNIP3LO60238 219 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 ESRRBO95718 433 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 CYBBP04839 570 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 HGFP14210 728 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 ITGB6P18564 788 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 SERPINA4P29622 427 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 HTRA4P83105 476 aaPredicted RBP22.31■■□□□ 1.16
LDB1-201ENST00000361198 RBM44Q6ZP01 1051 aaKnown RBP22.31■■□□□ 1.16
LDB1-201ENST00000361198 METTL3Q86U44 580 aaKnown RBP22.31■■□□□ 1.16
LDB1-201ENST00000361198 LKAAEAR1Q8TD35 194 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 TCEAL4Q96EI5 215 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 PDLIM5Q96HC4 596 aaKnown RBP22.31■■□□□ 1.16
LDB1-201ENST00000361198 TCF25Q9BQ70 676 aa22.31■■□□□ 1.16
LDB1-201ENST00000361198 PSMC3P17980 439 aa22.3■■□□□ 1.16
LDB1-201ENST00000361198 LBPP18428 481 aa22.3■■□□□ 1.16
LDB1-201ENST00000361198 ITGALP20701 1170 aa22.3■■□□□ 1.16
LDB1-201ENST00000361198 BORAQ6PGQ7 559 aa22.3■■□□□ 1.16
LDB1-201ENST00000361198 LAYNQ6UX15 382 aa22.3■■□□□ 1.16
LDB1-201ENST00000361198 RBFAQ8N0V3 343 aa22.3■■□□□ 1.16
LDB1-201ENST00000361198 CLP1Q92989 425 aaKnown RBP22.3■■□□□ 1.16
LDB1-201ENST00000361198 NMD3Q96D46 503 aaKnown RBP22.3■■□□□ 1.16
LDB1-201ENST00000361198 OSBPL11Q9BXB4 747 aa22.3■■□□□ 1.16
LDB1-201ENST00000361198 GLYATL1P3A0A0U1RQE8 302 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 NPIPB15A6NHN6 443 aaPredicted RBP22.29■■□□□ 1.16
LDB1-201ENST00000361198 MLYCDO95822 493 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 RPS3P23396 243 aaKnown RBP eCLIP22.29■■□□□ 1.166e-6■□□□□ 8.7
LDB1-201ENST00000361198 NAA20P61599 178 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 RBBP7Q16576 425 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 FUT11Q495W5 492 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 TMEM25Q86YD3 366 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 DCBLD1Q8N8Z6 715 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 TRBV5-4A0A0C4DH59 114 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 BBIP1A8MTZ0 92 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 GLUD1P00367 558 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 ACRV1P26436 265 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 SNRPD1P62314 119 aaKnown RBP22.29■■□□□ 1.16
LDB1-201ENST00000361198 MAP7Q14244 749 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 CHRNA6Q15825 494 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 ADRM1Q16186 407 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 ASTLQ6HA08 431 aaPredicted RBP22.29■■□□□ 1.16
LDB1-201ENST00000361198 SBSNQ6UWP8 590 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 ALDH16A1Q8IZ83 802 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 PCYOX1LQ8NBM8 494 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 OR56A4Q8NGH8 313 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 GPATCH1Q9BRR8 931 aaKnown RBP22.29■■□□□ 1.16
LDB1-201ENST00000361198 EFHD1Q9BUP0 239 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms