RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 CPT1BQ92523 772 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 DIRAS2Q96HU8 199 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 HOPXQ9BPY8 73 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 EBPLQ9BY08 206 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 IMP3Q9NV31 184 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 KCTD5Q9NXV2 234 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 PCDHGC3Q9UN70 934 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 PRKD3O94806 890 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 IPO13O94829 963 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 NFATC1O95644 943 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 RLN1P04808 185 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SMPD1P17405 629 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 VBP1P61758 197 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 PPP2R2BQ00005 443 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SNAP47Q5SQN1 464 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 CAPN13Q6MZZ7 669 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 PHYKPLQ8IUZ5 450 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 TRNT1Q96Q11 434 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 EXD2Q9NVH0 621 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 RAI2Q9Y5P3 530 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 PGRMC2O15173 223 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SEPT4O43236 478 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 FABP3P05413 133 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 LINGO4Q6UY18 593 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 CHSY3Q70JA7 882 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 UBE2J2Q8N2K1 259 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 C1orf127Q8N9H9 656 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 FAM156AQ8NDB6 213 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SMG7Q92540 1137 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SNX27Q96L92 541 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 RNF38Q9H0F5 515 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 PHPT1Q9NRX4 125 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SYN3O14994 580 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 RGS10O43665 173 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 GBE1Q04446 702 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 ELP6Q0PNE2 266 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 LCN1P1Q5VSP4 162 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 OGFOD2Q6N063 350 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 NCCRP1Q6ZVX7 275 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 KCTD8Q6ZWB6 473 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 P2RY8Q86VZ1 359 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 CADM1Q9BY67 442 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 DPEP3Q9H4B8 488 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 FAM124BQ9H5Z6 455 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SLC28A3Q9HAS3 691 aa12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 GPN1Q9HCN4 374 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 SAMD4AQ9UPU9 718 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 OAS3Q9Y6K5 1087 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-204ENST00000360524 C5orf60A6NFR6 353 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 TPST2O60704 377 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 ATG13O75143 517 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 ERN1O75460 977 aaKnown RBP12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 NOL4O94818 638 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 MAZP56270 477 aaKnown RBP12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 HKDC1Q2TB90 917 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 PITRM1Q5JRX3 1037 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 ZNF730Q6ZMV8 503 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 ZBTB2Q8N680 514 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 ACBD6Q9BR61 282 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 LMAN2LQ9H0V9 348 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 ST6GALNAC4Q9H4F1 302 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 DHX33Q9H6R0 707 aaKnown RBP12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 LRTM1Q9HBL6 345 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 PNPLA8Q9NP80 782 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 EVLQ9UI08 416 aaPredicted RBP12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 NUP50Q9UKX7 468 aa12.08□□□□□ -0.47
CCDC144A-204ENST00000360524 BAZ2BQ9UIF8 2168 aaKnown RBP12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 TOR1BO14657 336 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 DHX15O43143 795 aaKnown RBP12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 PPIBP23284 216 aaKnown RBP12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 SPAM1P38567 509 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 PSMD8P48556 350 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 ZYG11AQ6WRX3 759 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 C17orf64Q86WR6 236 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 NPAS4Q8IUM7 802 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 ZNF781Q8N8C0 355 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 PJA1Q8NG27 643 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 ZNF563Q8TA94 476 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 RELTQ969Z4 430 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 GBA3Q9H227 469 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 DSN1Q9H410 356 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 TMED5Q9Y3A6 229 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 STX16-NPEPL1H3BU86 382 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 STX16O14662 325 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 EFNA1P20827 205 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 CCNCP24863 283 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 OR2B6P58173 313 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 DSC2Q02487 901 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 FUT10Q6P4F1 479 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 KLHDC10Q6PID8 442 aa12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.08□□□□□ -0.48
CCDC144A-204ENST00000360524 POP5Q969H6 163 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms