RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 AP2A2O94973 939 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 TRIM16O95361 564 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 SP9P0CG40 484 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 ACADMP11310 421 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 FGF3P11487 239 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 ATP1B2P14415 290 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 MSH3P20585 1137 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 ATP5F1P24539 256 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 GPR1P46091 355 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 RGS4P49798 205 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 CLCN7P51798 805 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 DGKEP52429 567 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 TAS2R38P59533 333 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 IL2P60568 153 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 B4GALNT1Q00973 533 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 DPTQ07507 201 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 BST1Q10588 318 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 STX3Q13277 289 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 CRY1Q16526 586 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 TTLL9Q3SXZ7 439 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 GKAP1Q5VSY0 366 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 LIPMQ5VYY2 423 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 RAET1GQ6H3X3 334 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 SYT13Q7L8C5 426 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 KBTBD6Q86V97 674 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 NLRP8Q86W28 1048 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 ZNF687Q8N1G0 1237 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 GIMAP7Q8NHV1 300 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 FAM131CQ96AQ9 280 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 CCDC126Q96EE4 140 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 UNKQ9C0B0 810 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 MKRN2Q9H000 416 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 TFB2MQ9H5Q4 396 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 SLCO1B3Q9NPD5 702 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 FBXL12Q9NXK8 326 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 KLHL42Q9P2K6 505 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 FZD4Q9ULV1 537 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 NCKAP1Q9Y2A7 1128 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 MTF2Q9Y483 593 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 ANKRD12Q6UB98 2062 aa13.66□□□□□ -0.22
PDLIM5-203ENST00000359265 IQCF5A8MTL0 148 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 TMEM114B3SHH9 223 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 STK25O00506 426 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 PLRG1O43660 514 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 SLC25A14O95258 325 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 SBK3P0C264 359 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 C7P10643 843 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 ITGB6P18564 788 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 KIAA1161Q6NSJ0 714 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 USP30Q70CQ3 517 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 OTOAQ7RTW8 1153 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 ISCA2Q86U28 154 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 SLC22A9Q8IVM8 553 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 CACNA2D3Q8IZS8 1091 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 TMEM151AQ8N4L1 468 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 ZBTB2Q8N680 514 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 CLDN19Q8N6F1 224 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 PJA1Q8NG27 643 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 RHEBL1Q8TAI7 183 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 LKAAEAR1Q8TD35 194 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 KIAA1191Q96A73 305 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 LINGO1Q96FE5 620 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 C7orf26Q96N11 449 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 SLC30A3Q99726 388 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 IER2Q9BTL4 223 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 ALG9Q9H6U8 611 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 CD248Q9HCU0 757 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 LATS2Q9NRM7 1088 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 SPATS2LQ9NUQ6 558 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 OXSMQ9NWU1 459 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 GALPQ9UBC7 116 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 SERGEFQ9UGK8 458 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 ASPMQ8IZT6 3477 aa13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 SETXQ7Z333 2677 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-203ENST00000359265 CACNA1IQ9P0X4 2223 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 TCRBV21S2A2A0A5A6 115 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 KPNA5O15131 536 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 INPP4BO15327 924 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 SMIM24O75264 130 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 SOD1P00441 154 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 FTH1P02794 183 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 CBSLP0DN79 551 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 TROVE2P10155 538 aaKnown RBP eCLIP13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 SDHBP21912 280 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 DGKAP23743 735 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 CBSP35520 551 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 RPS9P46781 194 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 AGERQ15109 404 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 KIAA1324Q6UXG2 1013 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 TMEM92Q6UXU6 159 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 Q6ZS52 159 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 ZCCHC23Q6ZST2 131 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 SPATA21Q7Z572 469 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 PIGWQ7Z7B1 504 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 MYO1HQ8N1T3 1032 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 CCDC197Q8NCU1 140 aa13.64□□□□□ -0.23
PDLIM5-203ENST00000359265 STAG3L4Q8TBR4 150 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms