RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 BTBD16Q32M84 506 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM161BQ8NDZ6 487 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 P2RY11Q96G91 374 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 AIFM2Q9BRQ8 373 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 FAIM2Q9BWQ8 316 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF69Q9UC07 566 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 PRODHO43272 600 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 MAGEA12P43365 314 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 PABPC1LQ4VXU2 614 aaKnown RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 EIF5AL1Q6IS14 154 aaKnown RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 SLC37A3Q8NCC5 494 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 DNAJA4Q8WW22 397 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 CHIAQ9BZP6 476 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 LOC100130705A0A1B0GUX0 176 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ENDOD1O94919 500 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 SLITRK5O94991 958 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 COL6A1P12109 1028 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 PTPN3P26045 913 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 HTR2BP41595 481 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 FOXM1Q08050 763 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 SMARCB1Q12824 385 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 PLEKHG7Q6ZR37 379 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 GPR156Q8NFN8 814 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 HSFY1Q96LI6 401 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 LIN28AQ9H9Z2 209 aaKnown RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ABCC13Q9NSE7 274 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ACTR3BQ9P1U1 418 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 SCN4AP35499 1836 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM150BA6NC51 233 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 M0R233 179 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 RPL4P36578 427 aaKnown RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 CTC1Q2NKJ3 1217 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 FAM174BQ3ZCQ3 159 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 DCST1Q5T197 706 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 GCNT6Q5T4J0 391 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 CCSAPQ6IQ19 270 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ERMP1Q7Z2K6 904 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TBC1D17Q9HA65 648 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 DNAJC5BQ9UF47 199 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 NID2Q14112 1375 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 A0A1W2PPW3 197 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 INMTO95050 263 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 OR6A2O95222 327 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 GNAZP19086 355 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 CCR4P51679 360 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 NRG1Q02297 640 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 TAF13Q15543 124 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ANKRD22Q5VYY1 191 aa8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF548Q8NEK5 533 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF490Q9ULM2 529 aaPredicted RBP8.68□□□□□ -1.02
COL6A6-201ENST00000358511 ADAMTS13Q76LX8 1427 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SLC28A2O43868 658 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CPSF6Q16630 551 aaKnown RBP eCLIP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SLC9B1Q4ZJI4 515 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 GNASQ5JWF2 1037 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 GPR153Q6NV75 609 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 METTL7BQ6UX53 244 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PLD5Q8N7P1 536 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 BPIFB1Q8TDL5 484 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 C15orf40Q8WUR7 153 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 ACOT12Q8WYK0 555 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 SEC14L1Q92503 715 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 LRRC58Q96CX6 371 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 ATP13A1Q9HD20 1204 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 COMMD3Q9UBI1 195 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 TMX2Q9Y320 296 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 H0YAE9 185 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CSDE1O75534 798 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CATP04040 527 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 DNTTP04053 509 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 DLDP09622 509 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CKMT2P17540 419 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 GPALPP1Q8IXQ4 340 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 DNAJB8Q8NHS0 232 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CANT1Q8WVQ1 401 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 HTATIP2Q9BUP3 242 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF70Q9UC06 446 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RIC1Q4ADV7 1423 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 NUP98P52948 1817 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RGPD2P0DJD1 1756 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RIIAD1A6NNX1 92 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 H0YJX3 145 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF701M0R085 212 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 IGSF6O95976 241 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 PRH1P02810 166 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RGS1Q08116 209 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 ASTE1Q2TB18 679 aaPredicted RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 TAPT1Q6NXT6 567 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 HEXDCQ8WVB3 486 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 OXSMQ9NWU1 459 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 CNTN6Q9UQ52 1028 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RNF6Q9Y252 685 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 RPL36Q9Y3U8 105 aaKnown RBP8.67□□□□□ -1.02
COL6A6-201ENST00000358511 C17orf102A2RUQ5 167 aa8.67□□□□□ -1.02
COL6A6-201ENST00000358511 TRIM64BA6NI03 449 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms