RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C13orf42A0A1B0GVH6 325 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 NKRFO15226 690 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD3-202ENST00000358181 FAM228BP0C875 321 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 PGAM1P18669 254 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 GADD45AP24522 165 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CAPGP40121 348 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ZIM3Q96PE6 472 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 RTKNQ9BST9 563 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 IL17RBQ9NRM6 502 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 FTSJ1Q9UET6 329 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 IL20RAQ9UHF4 553 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 KCNIP3Q9Y2W7 256 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CD163L1Q9NR16 1453 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 TPP1O14773 563 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 B3GALT2O43825 422 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 KLK3P07288 261 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 EFNA1P20827 205 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 C2orf80Q0P641 193 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 XKRXQ6PP77 449 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 TMPRSS11AQ6ZMR5 421 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SNX32Q86XE0 403 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 GPALPP1Q8IXQ4 340 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 THAP3Q8WTV1 239 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 AP3S1Q92572 193 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 SLC7A6OSQ96CW6 309 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 DGAT2Q96PD7 388 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CDRT15Q96T59 188 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 ZNF184Q99676 751 aaPredicted RBP9.68□□□□□ -0.86
CHD3-202ENST00000358181 STRADBQ9C0K7 418 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 DEC1Q9P2X7 70 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CORO2BQ9UQ03 480 aa9.68□□□□□ -0.86
CHD3-202ENST00000358181 CLN5O75503 358 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PTNP21246 168 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 GNRHRP30968 328 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CD52P31358 61 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 MAP3K8P41279 467 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NRLP54845 237 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 ILF3Q12906 894 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD3-202ENST00000358181 GTF2H2Q13888 395 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CA9Q16790 459 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PDSS1Q5T2R2 415 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 GTF2H2CQ6P1K8 395 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 SYCE2Q6PIF2 218 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NPNTQ6UXI9 565 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 FAM43BQ6ZT52 329 aaPredicted RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 LIX1LQ8IVB5 337 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NPAS2Q99743 824 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 ZNF649Q9BS31 505 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 HCN4Q9Y3Q4 1203 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PNPLA6Q8IY17 1366 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NPIPA5E9PKD4 350 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 RFXANKO14593 260 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 FPGTO14772 594 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PPEF2O14830 753 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 SLC26A4O43511 780 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CLRN1P58418 232 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 SMIM11AP58511 58 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 SMAD3P84022 425 aaKnown RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 DEFA5Q01523 94 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NIPAL4Q0D2K0 466 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 TROAPQ12815 778 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PLEKHG6Q3KR16 790 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 TPCN2Q8NHX9 752 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NCSTNQ92542 709 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 KAZALD1Q96I82 304 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 LGR4Q9BXB1 951 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NPIPA1Q9UND3 350 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 ZC3H13Q5T200 1668 aaKnown RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 RFX7Q2KHR2 1363 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 SEC24AO95486 1093 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 MT-CYBP00156 380 aaPredicted RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 DUSP4Q13115 394 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 TMPPEQ6ZT21 453 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CD300LFQ8TDQ1 290 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 ERP44Q9BS26 406 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 EBPLQ9BY08 206 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 TBC1D17Q9HA65 648 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CTPS2Q9NRF8 586 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 GSKIPQ9P0R6 139 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 A0A0G2JN53 185 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PAPSS2O95340 614 aaPredicted RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 HEXBP07686 556 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 GRIA3P42263 894 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 MAPKAPK3Q16644 382 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 C6orf132Q5T0Z8 1188 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 DCDC5Q6ZRR9 648 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PRR18Q8N4B5 295 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PROKR2Q8NFJ6 384 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 GPR151Q8TDV0 419 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 LRMDAQ9H2I8 198 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PTPRUQ92729 1446 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 HHLA1C9JL84 531 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 SLCO1B7G3V0H7 640 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CLDN5O00501 218 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 ITGAVP06756 1048 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 VGLL4Q14135 290 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 UBE2UQ5VVX9 321 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms