RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FAM92AA1XBS5 289 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 FUOMA2VDF0 154 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 NPEPPSL1A6NEC2 478 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 CFAP99D6REC4 459 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 INPPL1O15357 1258 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 TBC1D4O60343 1298 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 IGLV3-27P01718 113 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 PKMP14618 531 aaKnown RBP17.49■□□□□ 0.39
RTN4-204ENST00000357732 ZNF182P17025 639 aaPredicted RBP17.49■□□□□ 0.39
RTN4-204ENST00000357732 TPP2P29144 1249 aaPredicted RBP17.49■□□□□ 0.39
RTN4-204ENST00000357732 OR1E1P30953 314 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 POLR2IP36954 125 aaKnown RBP17.49■□□□□ 0.39
RTN4-204ENST00000357732 CASP2P42575 452 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 IL2P60568 153 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 GSTM4Q03013 218 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 RING1Q06587 406 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 MGAT3Q09327 533 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 RGS21Q2M5E4 152 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 PYCR3Q53H96 274 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 OTUD3Q5T2D3 398 aaPredicted RBP17.49■□□□□ 0.39
RTN4-204ENST00000357732 TMEM214Q6NUQ4 689 aaKnown RBP17.49■□□□□ 0.39
RTN4-204ENST00000357732 RNF165Q6ZSG1 346 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 TTC30BQ8N4P2 665 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 ZNF555Q8NEP9 628 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 KCNJ9Q92806 393 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 RAD21L1Q9H4I0 556 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 SLAMF8Q9P0V8 285 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 TRMT6Q9UJA5 497 aaKnown RBP17.49■□□□□ 0.39
RTN4-204ENST00000357732 ERGIC3Q9Y282 383 aa17.49■□□□□ 0.39
RTN4-204ENST00000357732 C2orf81A6NN90 581 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 G3V2T6 193 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 TSPAN12O95859 305 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 MSH3P20585 1137 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 CES1P23141 567 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 ELK4P28324 431 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 PRDX3P30048 256 aaKnown RBP17.48■□□□□ 0.39
RTN4-204ENST00000357732 RELAQ04206 551 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 IL18R1Q13478 541 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 SLC2A7Q6PXP3 512 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 Q6ZSR9 355 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 ZC3H7AQ8IWR0 971 aaKnown RBP17.48■□□□□ 0.39
RTN4-204ENST00000357732 CENPSQ8N2Z9 138 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 GIPC2Q8TF65 315 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 RPRD1AQ96P16 312 aaPredicted RBP17.48■□□□□ 0.39
RTN4-204ENST00000357732 SH3GL1Q99961 368 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 RBM4BQ9BQ04 359 aaKnown RBP17.48■□□□□ 0.39
RTN4-204ENST00000357732 RBM4Q9BWF3 364 aaKnown RBP17.48■□□□□ 0.39
RTN4-204ENST00000357732 IKZF3Q9UKT9 509 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 TMX2-CTNND1H3BSU7 103 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 MTHFRP42898 656 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 MAGEA11P43364 429 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 YAP1P46937 504 aaKnown RBP17.48■□□□□ 0.39
RTN4-204ENST00000357732 BCAP31P51572 246 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 PTPRCAPQ14761 206 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 SLC39A12Q504Y0 691 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 RAP1GAP2Q684P5 730 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 UGT3A1Q6NUS8 523 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 FRA10AC1Q70Z53 315 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 ITIH5Q86UX2 942 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 FAM126BQ8IXS8 530 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 CARNMT1Q8N4J0 409 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 OSBPL10Q9BXB5 764 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 SOX17Q9H6I2 414 aaPredicted RBP17.48■□□□□ 0.39
RTN4-204ENST00000357732 ZNF711Q9Y462 761 aa17.48■□□□□ 0.39
RTN4-204ENST00000357732 MUSKO15146 869 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 ATP6V1G1O75348 118 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 OAZ2O95190 189 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 KCNH1O95259 989 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 OR4Q2P0C623 313 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 CD52P31358 61 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 SHMT2P34897 504 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 NR1D2Q14995 579 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 PCBP2Q15366 365 aaKnown RBP eCLIP17.47■□□□□ 0.399e-21■■□□□ 12.6
RTN4-204ENST00000357732 PTPRNQ16849 979 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 CXCL17Q6UXB2 119 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 STK32CQ86UX6 486 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 SERINC5Q86VE9 423 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 SPARTQ8N0X7 666 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 PDLIM5Q96HC4 596 aaKnown RBP17.47■□□□□ 0.39
RTN4-204ENST00000357732 ZNF347Q96SE7 839 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 LHPPQ9H008 270 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 FAM118AQ9NWS6 357 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 GIN1Q9NXP7 522 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 GALPQ9UBC7 116 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 PDE10AQ9Y233 779 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 NAALAD2Q9Y3Q0 740 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 IL1RNP18510 177 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 AGTR2P50052 363 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 KPNA1P52294 538 aaPredicted RBP17.47■□□□□ 0.39
RTN4-204ENST00000357732 PPP2R2BQ00005 443 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 EFEMP1Q12805 493 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 DSC3Q14574 896 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 RFX4Q33E94 735 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 C5orf22Q49AR2 442 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 C6orf141Q5SZD1 244 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 GLT6D1Q7Z4J2 308 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 R3HCC1LQ7Z5L2 792 aaKnown RBP17.47■□□□□ 0.39
RTN4-204ENST00000357732 PDZD8Q8NEN9 1154 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms