RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ENAMQ9NRM1 1142 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PHPT1Q9NRX4 125 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-202ENST00000357409 VNN3Q9NY84 501 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 VAV3Q9UKW4 847 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 NOX1Q9Y5S8 564 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 A0A087X1B8 175 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 NIPSNAP2O75323 286 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 NFATC1O95644 943 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 C2P06681 752 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 RAB25P57735 213 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FAM187BQ17R55 369 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FAM69BQ5VUD6 431 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 LRIG3Q6UXM1 1119 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 CLDN19Q8N6F1 224 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 SAMD3Q8N6K7 520 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 GSTCDQ8NEC7 633 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 VCPIP1Q96JH7 1222 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FBXL18Q96ME1 805 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 FRMPD4Q14CM0 1322 aa7.28□□□□□ -1.24
VPS13A-202ENST00000357409 PRR5-ARHGAP8B1AHC4 643 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 STX16-NPEPL1H3BU86 382 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 STX16O14662 325 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 NARSO43776 548 aaKnown RBP7.27□□□□□ -1.24
VPS13A-202ENST00000357409 CLDN7O95471 211 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 CYP1A1P04798 512 aaPredicted RBP7.27□□□□□ -1.24
VPS13A-202ENST00000357409 JUNP05412 331 aaKnown RBP7.27□□□□□ -1.24
VPS13A-202ENST00000357409 ARHGAP8P85298 464 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 GAD2Q05329 585 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 PPIGQ13427 754 aaKnown RBP eCLIP7.27□□□□□ -1.248e-8■■■□□ 16.5
VPS13A-202ENST00000357409 TIGD2Q4W5G0 525 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 AFTPHQ6ULP2 937 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 GPAT4Q86UL3 456 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 STX12Q86Y82 276 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 CMTR2Q8IYT2 770 aaKnown RBP7.27□□□□□ -1.24
VPS13A-202ENST00000357409 TERB1Q8NA31 727 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 ASPNQ9BXN1 380 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 CEP44Q9C0F1 390 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 IL22Q9GZX6 179 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 ANKZF1Q9H8Y5 726 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 EXD2Q9NVH0 621 aa7.27□□□□□ -1.24
VPS13A-202ENST00000357409 A0A1W2PP55 124 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 TCRBV7S3A2A0A539 114 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 VILLO15195 856 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 TMCC2O75069 709 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF865P0CJ78 1059 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 PKMP14618 531 aaKnown RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MAPK12P53778 367 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 ERV3-1Q14264 604 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 KDM7AQ6ZMT4 941 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 SNX20Q7Z614 316 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 CALR3Q96L12 384 aaKnown RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 HMG20AQ9NP66 347 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 STARD5Q9NSY2 213 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 RNF186Q9NXI6 227 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 FEZF1A0PJY2 475 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MAGEA13PA6NCF6 341 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 KRT36O76013 467 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 RPL9P32969 192 aaKnown RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 SLC7A2P52569 658 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 RCAN1P53805 252 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MTPNP58546 118 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 BNIP1Q12981 228 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 ARHGAP40Q5TG30 622 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 OR10A6Q8NH74 314 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 RUBCNQ92622 972 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 TINAGL1Q9GZM7 467 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 POLR3BQ9NW08 1133 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 TVP23BQ9NYZ1 205 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 SLC22A14Q9Y267 594 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 COLEC10Q9Y6Z7 277 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 CD163L1Q9NR16 1453 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 CEP170BQ9Y4F5 1589 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 A0A0A0MRY4 1105 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 LAMP2P13473 410 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 TCF4P15884 667 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 SNRPFP62306 86 aaKnown RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MBLAC2Q68D91 279 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 JAZF1Q86VZ6 243 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 ACTRT1Q8TDG2 376 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 BAP1Q92560 729 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 FATE1Q969F0 183 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 SPATA13Q96N96 652 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 GFM1Q96RP9 751 aaKnown RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 EPYCQ99645 322 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MACROD1Q9BQ69 325 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 BDH2Q9BUT1 245 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 B3GNT4Q9C0J1 378 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MIOSQ9NXC5 875 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MOCS1Q9NZB8 636 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 HPSEQ9Y251 543 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 GSTK1Q9Y2Q3 226 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 A6NCN8 305 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 SNTNA6NMZ2 147 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 BHMG1C9JSJ3 638 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-202ENST00000357409 ARVCFO00192 962 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 GCATO75600 419 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 RLN1P04808 185 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 CALB2P22676 271 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 MATKP42679 507 aa7.27□□□□□ -1.25
VPS13A-202ENST00000357409 UGT2B15P54855 530 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms