RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 PLEKHS1Q5SXH7 462 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 ACAD11Q709F0 780 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 FRA10AC1Q70Z53 315 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 KCNV2Q8TDN2 545 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 KLHL29Q96CT2 875 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 ZDHHC4Q9NPG8 344 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 TCF7L2Q9NQB0 619 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 CD274Q9NZQ7 290 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 FADS3Q9Y5Q0 445 aa22.5■■□□□ 1.19
SCAMP3-202ENST00000355379 UBFD1O14562 309 aaKnown RBP22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 RAD51BO15315 384 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 AP1G1O43747 822 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 CBX6O95503 412 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 ADH1BP00325 375 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 MPC1LP0DKB6 136 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 C6P13671 934 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 CALB2P22676 271 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 DPTQ07507 201 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 CNTN1Q12860 1018 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 PPP1R3AQ16821 1122 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 AAK1Q2M2I8 961 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 RPS27LQ71UM5 84 aaKnown RBP22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 MICALL1Q8N3F8 863 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 PDPRQ8NCN5 879 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 ZNF483Q8TF39 744 aaPredicted RBP22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 NAT14Q8WUY8 206 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 EZH1Q92800 747 aaPredicted RBP22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 NUS1Q96E22 293 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 MAELQ96JY0 434 aaKnown RBP22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 LRMDAQ9H2I8 198 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 RDH14Q9HBH5 336 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 TRIM33Q9UPN9 1127 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 CDYLQ9Y232 598 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 TRAF6Q9Y4K3 522 aa22.49■■□□□ 1.19
SCAMP3-202ENST00000355379 SPECC1L-ADORA2AF8WAN1 911 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 SGTAO43765 313 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 RECQL5O94762 991 aaPredicted RBP22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 FTH1P02794 183 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 S100BP04271 92 aaPredicted RBP22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 AOC1P19801 751 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 IGFBP4P22692 258 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 CLCQ05315 142 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 PIP5KL1Q5T9C9 394 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 CLYBLQ8N0X4 340 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 CXorf40AQ8TE69 158 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 SLC7A6OSQ96CW6 309 aaPredicted RBP22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 NUF2Q9BZD4 464 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 ARHGEF3Q9NR81 526 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 ARMCX1Q9P291 453 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 TNPO3Q9Y5L0 923 aaKnown RBP22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 CDH23Q9H251 3354 aa22.48■■□□□ 1.19
SCAMP3-202ENST00000355379 GRXCR2A6NFK2 248 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 LRRC14BA6NHZ5 514 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 PLK4O00444 970 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 NEMP1O14524 444 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 NUAK1O60285 661 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 LZTS3O60299 673 aaPredicted RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 CDK14O94921 469 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 C5AR1P21730 350 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 CTHP32929 405 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 INHBCP55103 352 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 PCBP2Q15366 365 aaKnown RBP eCLIP22.47■■□□□ 1.195e-11■■□□□ 12.1
SCAMP3-202ENST00000355379 CST6Q15828 149 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 KHDC1Q4VXA5 237 aaKnown RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 NEK10Q6ZWH5 1172 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 RALGPS2Q86X27 583 aaPredicted RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 PHYKPLQ8IUZ5 450 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 OR52B2Q96RD2 323 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 EPHX3Q9H6B9 360 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 C8orf33Q9H7E9 229 aaPredicted RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 FBRSQ9HAH7 460 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 PCTPQ9UKL6 214 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 COQ6Q9Y2Z9 468 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 FFAR2O15552 330 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 SYNCRIPO60506 623 aaKnown RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 MMP20O60882 483 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 MLYCDO95822 493 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 PTPN4P29074 926 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 DRD3P35462 400 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 WASP42768 502 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 CDH13P55290 713 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 SH3BP2P78314 561 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 LCP2Q13094 533 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 CDKL4Q5MAI5 379 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 DET1Q7L5Y6 550 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 TREML1Q86YW5 311 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 PPM1EQ8WY54 764 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 GABRG3Q99928 467 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 WDR55Q9H6Y2 383 aaPredicted RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 MEAF6Q9HAF1 191 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 TNFRSF12AQ9NP84 129 aa22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 MBD1Q9UIS9 605 aaPredicted RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 CNOT6Q9ULM6 557 aaKnown RBP22.47■■□□□ 1.19
SCAMP3-202ENST00000355379 NCF1BA6NI72 391 aaPredicted RBP22.46■■□□□ 1.19
SCAMP3-202ENST00000355379 NCF1CA8MVU1 366 aaPredicted RBP22.46■■□□□ 1.19
SCAMP3-202ENST00000355379 TMEM233B4DJY2 109 aa22.46■■□□□ 1.19
SCAMP3-202ENST00000355379 H0YHG0 523 aa22.46■■□□□ 1.19
SCAMP3-202ENST00000355379 SDHDO14521 159 aa22.46■■□□□ 1.19
SCAMP3-202ENST00000355379 TSPAN6O43657 245 aa22.46■■□□□ 1.19
SCAMP3-202ENST00000355379 SOD1P00441 154 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms