RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PKNOX1P55347 436 aa16.97■□□□□ 0.31
VPS13B-201ENST00000355155 KLF10Q13118 480 aa16.97■□□□□ 0.31
VPS13B-201ENST00000355155 YAF2Q8IY57 180 aa16.97■□□□□ 0.31
VPS13B-201ENST00000355155 CMTM5Q96DZ9 223 aa16.97■□□□□ 0.31
VPS13B-201ENST00000355155 FAM126AQ9BYI3 521 aaPredicted RBP16.97■□□□□ 0.31
VPS13B-201ENST00000355155 ARMCX1Q9P291 453 aa16.97■□□□□ 0.31
VPS13B-201ENST00000355155 GSC2O15499 205 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 SUPT7LO94864 414 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 KAT7O95251 611 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 EEF1DP29692 281 aaKnown RBP16.96■□□□□ 0.31
VPS13B-201ENST00000355155 CPOXP36551 454 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 RAP1GDS1P52306 607 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 UBAP2LQ14157 1087 aaKnown RBP16.96■□□□□ 0.31
VPS13B-201ENST00000355155 ACSBG2Q5FVE4 666 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 RINLQ6ZS11 566 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.31
VPS13B-201ENST00000355155 MAGEC3Q8TD91 643 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 PRSS16Q9NQE7 514 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 CDH22Q9UJ99 828 aa16.96■□□□□ 0.31
VPS13B-201ENST00000355155 SPECC1L-ADORA2AF8WAN1 911 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 H0YHG0 523 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 RAD51BO15315 384 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 BNIP3LO60238 219 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 VPS4BO75351 444 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 PRR35P0CG20 571 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 GFAPP14136 432 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 TEAD1P28347 426 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 KDSRQ06136 332 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 CAMK2GQ13555 558 aaPredicted RBP16.96■□□□□ 0.3
VPS13B-201ENST00000355155 DNAL1Q4LDG9 190 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 NUDT18Q6ZVK8 323 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 PAF1Q8N7H5 531 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 CADM1Q9BY67 442 aaKnown RBP16.96■□□□□ 0.3
VPS13B-201ENST00000355155 MTG2Q9H4K7 406 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 TMEM45AQ9NWC5 275 aa16.96■□□□□ 0.3
VPS13B-201ENST00000355155 FADS2P1A8MWK0 482 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 CFAP99D6REC4 459 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 GPC4O75487 556 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 JUNP05412 331 aaKnown RBP16.95■□□□□ 0.3
VPS13B-201ENST00000355155 LTBRP36941 435 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 IL12RB1P42701 662 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 PTK2BQ14289 1009 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 BCL7AQ4VC05 210 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 SULT1C3Q6IMI6 304 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 PARM1Q6UWI2 310 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 TEX9Q8N6V9 391 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 NUF2Q9BZD4 464 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 C1QTNF3-AMACRE9PGA6 284 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 WNT9AO14904 365 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 SOD1P00441 154 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 APODP05090 189 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 C8GP07360 202 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 ADRB3P13945 408 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 CCR7P32248 378 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 MAPK9P45984 424 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 HTR4Q13639 388 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 WASHC2DQ5SRD0 308 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 PHYKPLQ8IUZ5 450 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 FGF14Q92915 247 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 SPATA16Q9BXB7 569 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 RSPH9Q9H1X1 276 aaPredicted RBP16.95■□□□□ 0.3
VPS13B-201ENST00000355155 FBRSQ9HAH7 460 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 KLC4Q9NSK0 619 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 TICRRQ7Z2Z1 1910 aa16.95■□□□□ 0.3
VPS13B-201ENST00000355155 GFYI3L273 518 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 AZIN1O14977 448 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 SLCO2B1O94956 709 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 ESRRBO95718 433 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 Q6ZVL8 140 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 ERN2Q76MJ5 926 aaKnown RBP16.94■□□□□ 0.3
VPS13B-201ENST00000355155 TCAIMQ8N3R3 496 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 CLDN19Q8N6F1 224 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 OR56A4Q8NGH8 313 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 RP9Q8TA86 221 aaKnown RBP16.94■□□□□ 0.3
VPS13B-201ENST00000355155 GLYATL1Q969I3 302 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 RTKNQ9BST9 563 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 TRMT61BQ9BVS5 477 aaKnown RBP16.94■□□□□ 0.3
VPS13B-201ENST00000355155 ZBTB26Q9HCK0 441 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 GTSE1Q9NYZ3 720 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 CNOT6Q9ULM6 557 aaKnown RBP16.94■□□□□ 0.3
VPS13B-201ENST00000355155 HGSO14964 777 aaPredicted RBP16.94■□□□□ 0.3
VPS13B-201ENST00000355155 FFAR2O15552 330 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 SIX3O95343 332 aaPredicted RBP16.94■□□□□ 0.3
VPS13B-201ENST00000355155 FTH1P02794 183 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 ELFN1P0C7U0 828 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 XPAP23025 273 aaPredicted RBP16.94■□□□□ 0.3
VPS13B-201ENST00000355155 ETV3P41162 512 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 PRLHRP49683 370 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 ZNF284Q2VY69 593 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 FAM46CQ5VWP2 391 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 KIF2BQ8N4N8 673 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 SLC12A9Q9BXP2 914 aa16.94■□□□□ 0.3
VPS13B-201ENST00000355155 A8MX80 341 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 TMEM233B4DJY2 109 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 XKR7Q5GH72 579 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 OGFOD2Q6N063 350 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 SMRP1Q8NCR6 262 aa16.93■□□□□ 0.3
VPS13B-201ENST00000355155 LINC00615Q96LM1 132 aaPredicted RBP16.93■□□□□ 0.3
VPS13B-201ENST00000355155 RIOK2Q9BVS4 552 aaKnown RBP16.93■□□□□ 0.3
VPS13B-201ENST00000355155 WDR55Q9H6Y2 383 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms