RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 KIFC1Q9BW19 673 aa7.78□□□□□ -1.16
CD46-203ENST00000354848 LRRC3Q9BY71 257 aa7.78□□□□□ -1.16
CD46-203ENST00000354848 TDRD3Q9H7E2 651 aaKnown RBP7.78□□□□□ -1.16
CD46-203ENST00000354848 RANGRFQ9HD47 186 aaPredicted RBP7.78□□□□□ -1.16
CD46-203ENST00000354848 TMPRSS4Q9NRS4 437 aa7.78□□□□□ -1.16
CD46-203ENST00000354848 SETD4Q9NVD3 440 aa7.78□□□□□ -1.16
CD46-203ENST00000354848 MAT2BQ9NZL9 334 aa7.78□□□□□ -1.16
CD46-203ENST00000354848 AGO1Q9UL18 857 aaKnown RBP7.78□□□□□ -1.16
CD46-203ENST00000354848 TBC1D24Q9ULP9 559 aa7.78□□□□□ -1.16
CD46-203ENST00000354848 A0A0U1RQS6 177 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 TYW5A2RUC4 315 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 OR2A25A4D2G3 310 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 HMX3A6NHT5 357 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ERI2A8K979 691 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 PPP6CO00743 305 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 EEDO75530 441 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 IL7P13232 177 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 HOXD8P13378 290 aaPredicted RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 LBPP18428 481 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 PTGS2P35354 604 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 SLC1A2P43004 574 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 MVKQ03426 396 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 NKG7Q16617 165 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 RBM20Q5T481 1227 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 AGAP9Q5VTM2 703 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 TMEM179BQ7Z7N9 219 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 SVOPLQ8N434 492 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 FBXL6Q8N531 539 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ZNF540Q8NDQ6 660 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 APPL2Q8NEU8 664 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 GPRASP2Q96D09 838 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 SLC39A13Q96H72 371 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 TUBB1Q9H4B7 451 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ENTPD7Q9NQZ7 604 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ABI2Q9NYB9 513 aaPredicted RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 TMEFF2Q9UIK5 374 aaPredicted RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 UTS2RQ9UKP6 389 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 MKLN1Q9UL63 735 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 GPR45Q9Y5Y3 372 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 DICER1Q9UPY3 1922 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 GNGT2O14610 69 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 RGS10O43665 173 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ZNF780AO75290 641 aaPredicted RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 DNTTP04053 509 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ANXA6P08133 673 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 NFICP08651 508 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 LTA4HP09960 611 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 CXCL8P10145 99 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 NAT2P11245 290 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 CBLP22681 906 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 NOS2P35228 1153 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 LIPAP38571 399 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 SLC15A1P46059 708 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 CDH17Q12864 832 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 SOWAHAQ2M3V2 549 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 UNC50Q53HI1 259 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ENPP6Q6UWR7 440 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 RAB43Q86YS6 212 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 RIOX2Q8IUF8 465 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 TMEM192Q8IY95 271 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 TMEM199Q8N511 208 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 BRSK1Q8TDC3 778 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 RNF139Q8WU17 664 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 TSPEARQ8WU66 669 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 SLC38A4Q969I6 547 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ISG20Q96AZ6 181 aaKnown RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 CYP2S1Q96SQ9 504 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 AIFM2Q9BRQ8 373 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ROGDIQ9GZN7 287 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 CYP3A43Q9HB55 503 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 POLR3BQ9NW08 1133 aaPredicted RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 COMMD8Q9NX08 183 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 ERVK13-1Q9NX77 482 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 SCN3BQ9NY72 215 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 RCOR3Q9P2K3 495 aaPredicted RBP7.77□□□□□ -1.17
CD46-203ENST00000354848 POLG2Q9UHN1 485 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 FZD10Q9ULW2 581 aa7.77□□□□□ -1.17
CD46-203ENST00000354848 MEIOCA2RUB1 952 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 G3V3G9 751 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 GSTM1P09488 218 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 LINC00032P0C843 101 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 CPB1P15086 417 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 NFKB1P19838 968 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 KCNC1P48547 511 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 SERPINH1P50454 418 aaKnown RBP7.76□□□□□ -1.17
CD46-203ENST00000354848 POU6F2P78424 691 aaPredicted RBP7.76□□□□□ -1.17
CD46-203ENST00000354848 POU4F1Q01851 419 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 MXD4Q14582 209 aaPredicted RBP7.76□□□□□ -1.17
CD46-203ENST00000354848 PAFAH1B3Q15102 231 aaKnown RBP7.76□□□□□ -1.17
CD46-203ENST00000354848 SMN1Q16637 294 aaKnown RBP7.76□□□□□ -1.17
CD46-203ENST00000354848 PKDCCQ504Y2 493 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 DENND5AQ6IQ26 1287 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 SDE2Q6IQ49 451 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 FBXO30Q8TB52 745 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 GIPC2Q8TF65 315 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 SEPT1Q8WYJ6 367 aa7.76□□□□□ -1.17
CD46-203ENST00000354848 L3HYPDHQ96EM0 354 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms