RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TBCCQ15814 346 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CNGA3Q16281 694 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TAF12Q16514 161 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 PCSK7Q16549 785 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 INAVAQ3KP66 663 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 FUT11Q495W5 492 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TTC31Q49AM3 519 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 SIRPB2Q5JXA9 342 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 LY6G5CQ5SRR4 150 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CES4AQ5XG92 561 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 NEPROQ6NW34 567 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 RFWD3Q6PCD5 774 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TRMT11Q7Z4G4 463 aaKnown RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 CLNKQ7Z7G1 428 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CMC1Q7Z7K0 106 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ZNF354CQ86Y25 554 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 DENND1CQ8IV53 801 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 NAT16Q8N8M0 369 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TERB1Q8NA31 727 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 HJURPQ8NCD3 748 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 OR13J1Q8NGT2 312 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 GPR150Q8NGU9 434 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TMEM237Q96Q45 408 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TRIB3Q96RU7 358 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 CCNL2Q96S94 520 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 CINPQ9BW66 212 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 THSD1Q9NS62 852 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TMEM216Q9P0N5 145 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ZFP69BQ9UJL9 534 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 TLK1Q9UKI8 766 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 FBXO5Q9UKT4 447 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ZNF510Q9Y2H8 683 aa8.16□□□□□ -1.1
CD44-205ENST00000352818 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.16□□□□□ -1.1
CD44-205ENST00000352818 CCDC168Q8NDH2 2452 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 NUMA1Q14980 2115 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 A0A0G2JND7 137 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 FAM95CA0A1B0GW59 222 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 CDRT15L2A8MXV6 281 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 PRRT4C9JH25 899 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 G3V2L1 256 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 MUSKO15146 869 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 LDB2O43679 373 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 NOBOXO60393 691 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 GREM1O60565 184 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 HAUS5O94927 633 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 NDST3O95803 873 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 AHSGP02765 367 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 WNT1P04628 370 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC35E2BP0CK96 405 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 NQO1P15559 274 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 CKMT2P17540 419 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 WT1P19544 449 aaPredicted RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 OGNP20774 298 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 ACP1P24666 158 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC26A3P40879 764 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 LEPRP48357 1165 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 RASSF2P50749 326 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 ABCE1P61221 599 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 RPS24P62847 133 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC7A9P82251 487 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC20A2Q08357 652 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SF3A3Q12874 501 aaKnown RBP eCLIP8.15□□□□□ -1.1
CD44-205ENST00000352818 RIPK1Q13546 671 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 USP10Q14694 798 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 PROX2Q3B8N5 592 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 INO80DQ53TQ3 878 aaPredicted RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 ZNF470Q6ECI4 717 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 CXorf57Q6NSI4 855 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 C16orf46Q6P387 395 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 ZYG11AQ6WRX3 759 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 CILP2Q8IUL8 1156 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 C10orf107Q8IVU9 208 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 WDR75Q8IWA0 830 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 CHPFQ8IZ52 775 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 CPXM2Q8N436 756 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC25A41Q8N5S1 370 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 OR7D4Q8NG98 312 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 PIWIL2Q8TC59 973 aaKnown RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 BRSK1Q8TDC3 778 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 STYXQ8WUJ0 223 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SGF29Q96ES7 293 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 IFT43Q96FT9 208 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 TSPAN17Q96FV3 270 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 TSNARE1Q96NA8 513 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC46A1Q96NT5 459 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 NUDCD1Q96RS6 583 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 ELF4Q99607 663 aaPredicted RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 ARHGAP9Q9BRR9 750 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 RNF38Q9H0F5 515 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 NMRAL1Q9HBL8 299 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 DNAJC28Q9NX36 388 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC2A6Q9UGQ3 507 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 HAO1Q9UJM8 370 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 DCTN4Q9UJW0 460 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 SLC39A10Q9ULF5 831 aa8.15□□□□□ -1.1
CD44-205ENST00000352818 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.1
CD44-205ENST00000352818 MYOFQ9NZM1 2061 aa8.15□□□□□ -1.11
CD44-205ENST00000352818 HIVEP3Q5T1R4 2406 aa8.14□□□□□ -1.11
CD44-205ENST00000352818 A0A0D9SEW6 157 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms