RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 RMDN1Q96DB5 314 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 PPM1MQ96MI6 270 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 SMIM14Q96QK8 99 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 CGREF1Q99674 301 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 TLR8Q9NR97 1041 aaKnown RBP24.22■■□□□ 1.47
CPNE1-202ENST00000352393 OR1I1O60431 355 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 SEC14L2O76054 403 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 ANXA6P08133 673 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 TCF3P15923 654 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 GGT1P19440 569 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 HTR6P50406 440 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 TMBIM6P55061 237 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 IL2P60568 153 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 TAF10Q12962 218 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 NFATC3Q12968 1075 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 ZIK1Q3SY52 487 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-202ENST00000352393 C5orf22Q49AR2 442 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 ATAD1Q8NBU5 361 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 OR7D4Q8NG98 312 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 ACDQ96AP0 544 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 CDK15Q96Q40 435 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 TDRD1Q9BXT4 1180 aaKnown RBP24.22■■□□□ 1.47
CPNE1-202ENST00000352393 C2orf81A6NN90 581 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 ANKRD28O15084 1053 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 NOL3O60936 208 aaKnown RBP24.21■■□□□ 1.47
CPNE1-202ENST00000352393 HPRP00739 348 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 THRBP10828 461 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 IMPDH2P12268 514 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 CR2P20023 1033 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 MATN1P21941 496 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 GNA12Q03113 381 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 LGI2Q8N0V4 545 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 CFAP52Q8N1V2 620 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 CINPQ9BW66 212 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-202ENST00000352393 PAIP1Q9H074 479 aaKnown RBP24.21■■□□□ 1.47
CPNE1-202ENST00000352393 MAGEH1Q9H213 219 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 FANCEQ9HB96 536 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 FKBPLQ9UIM3 349 aa24.21■■□□□ 1.47
CPNE1-202ENST00000352393 F5H5T6 163 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 B4GAT1O43505 415 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 TTPAP49638 278 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 VARS2Q5ST30 1063 aaKnown RBP24.2■■□□□ 1.47
CPNE1-202ENST00000352393 BROXQ5VW32 411 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 CYP20A1Q6UW02 462 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 XKR5Q6UX68 686 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 ITFG1Q8TB96 612 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 GIPC3Q8TF64 312 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 CCDC115Q96NT0 180 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 NUDT4Q9NZJ9 180 aa24.2■■□□□ 1.47
CPNE1-202ENST00000352393 TDRKHQ9Y2W6 561 aaKnown RBP24.2■■□□□ 1.47
CPNE1-202ENST00000352393 INSIG1O15503 277 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 G6PDP11413 515 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 MC4RP32245 332 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 BNIP3Q12983 259 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 PWP1Q13610 501 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 TGFBIQ15582 683 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 XAF1Q6GPH4 301 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 KCNJ9Q92806 393 aa24.2■■□□□ 1.46
CPNE1-202ENST00000352393 UBA2Q9UBT2 640 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-202ENST00000352393 ARIH1Q9Y4X5 557 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-202ENST00000352393 IFRD1O00458 451 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 LSM1O15116 133 aaKnown RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 ZSCAN9O15535 394 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 CAPN1P07384 714 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 LPOP22079 712 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 RAB15P59190 212 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 FAM98BQ52LJ0 330 aaKnown RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 HABP4Q5JVS0 413 aaKnown RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 OR8J3Q8NGG0 315 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 SOCS4Q8WXH5 440 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 EXOC2Q96KP1 924 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 COMMD8Q9NX08 183 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 SMPD4Q9NXE4 827 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 CCNA2P20248 432 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 UGT1A1P22309 533 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 UGT1A4P22310 534 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 SLC6A4P31645 630 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 UGT1A3P35503 534 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 UGT1A5P35504 534 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 CLCN4P51793 760 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 TUBA3CQ13748 450 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 MOGQ16653 247 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 GLB1LQ6UWU2 654 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 SNX19Q92543 992 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 RDH12Q96NR8 316 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 CCSER2Q9H7U1 834 aa24.19■■□□□ 1.46
CPNE1-202ENST00000352393 CARS2Q9HA77 564 aaKnown RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 MAGED1Q9Y5V3 778 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-202ENST00000352393 ABCB7O75027 752 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 CBFA2T3O75081 653 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 TFPTP0C1Z6 253 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 JAK1P23458 1154 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 EEF1B2P24534 225 aaKnown RBP24.18■■□□□ 1.46
CPNE1-202ENST00000352393 KCNQ1P51787 676 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 RBM48Q5RL73 367 aaKnown RBP24.18■■□□□ 1.46
CPNE1-202ENST00000352393 IL27RAQ6UWB1 636 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 FAM126BQ8IXS8 530 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 LPCAT1Q8NF37 534 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 METTL6Q8TCB7 284 aa24.18■■□□□ 1.46
CPNE1-202ENST00000352393 PLEKHA8Q96JA3 519 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms