RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 DMPKQ09013 629 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
SEC13-202ENST00000350697 SMAD1Q15797 465 aaKnown RBP13.72□□□□□ -0.21
SEC13-202ENST00000350697 TYSND1Q2T9J0 566 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 RNF187Q5TA31 235 aaPredicted RBP13.72□□□□□ -0.21
SEC13-202ENST00000350697 STEAP4Q687X5 459 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 OGFOD3Q6PK18 319 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 UNC5AQ6ZN44 842 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 LDB1Q86U70 411 aaPredicted RBP13.72□□□□□ -0.21
SEC13-202ENST00000350697 KCNMB4Q86W47 210 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 CILP2Q8IUL8 1156 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 SLC35F3Q8IY50 421 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 BEND7Q8N7W2 519 aaPredicted RBP13.72□□□□□ -0.21
SEC13-202ENST00000350697 ARL10Q8N8L6 244 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 GABPB2Q8TAK5 448 aaPredicted RBP13.72□□□□□ -0.21
SEC13-202ENST00000350697 ZDHHC1Q8WTX9 485 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 PYROXD1Q8WU10 500 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 NAT14Q8WUY8 206 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 OSGEPL1Q9H4B0 414 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 SAYSD1Q9NPB0 183 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 IL1RAPL1Q9NZN1 696 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 SIRPGQ9P1W8 387 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 DNAJC16Q9Y2G8 782 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 PRSS21Q9Y6M0 314 aa13.72□□□□□ -0.21
SEC13-202ENST00000350697 MGAT4DA6NG13 374 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 PRR19A6NJB7 356 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 PRMT5O14744 637 aaPredicted RBP13.71□□□□□ -0.22
SEC13-202ENST00000350697 GSTM1P09488 218 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 OR56A5P0C7T3 313 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 CKMT1AP12532 417 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 CKMT2P17540 419 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 IDSP22304 550 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 DUSP3P51452 185 aaPredicted RBP13.71□□□□□ -0.22
SEC13-202ENST00000350697 GSTM4Q03013 218 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 NR0B2Q15466 257 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 HSP90AA5PQ58FG0 334 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 ZNF470Q6ECI4 717 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 KYQ8NBH2 561 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 LRRN4CLQ8ND94 238 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 GPR156Q8NFN8 814 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 FAM167BQ9BTA0 163 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 PLAC1Q9HBJ0 212 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 ARGLU1Q9NWB6 273 aaPredicted RBP13.71□□□□□ -0.22
SEC13-202ENST00000350697 GULP1Q9UBP9 304 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 TBC1D29Q9UFV1 150 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 MTRF1LQ9UGC7 380 aaKnown RBP13.71□□□□□ -0.22
SEC13-202ENST00000350697 VPS9D1Q9Y2B5 631 aa13.71□□□□□ -0.22
SEC13-202ENST00000350697 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 LY6G6EA0A0G2JKS1 128 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 C17orf113A0A1B0GUU1 675 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 NOBOXO60393 691 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 SNX2O60749 519 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 RHOXF2BP0C7M4 288 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 SLC2A4P14672 509 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 RPS3P23396 243 aaKnown RBP eCLIP13.7□□□□□ -0.223e-8■■■□□ 19.1
SEC13-202ENST00000350697 MCM3P25205 808 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 PBLDP30039 288 aaPredicted RBP13.7□□□□□ -0.22
SEC13-202ENST00000350697 CUL1Q13616 776 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 FRG1Q14331 258 aaKnown RBP13.7□□□□□ -0.22
SEC13-202ENST00000350697 HLTFQ14527 1009 aaKnown RBP eCLIP13.7□□□□□ -0.22
SEC13-202ENST00000350697 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 LRRC6Q86X45 466 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 UNC5BQ8IZJ1 945 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 NAGSQ8N159 534 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 OR2L2Q8NH16 312 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 HM13Q8TCT9 377 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 IFT81Q8WYA0 676 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 CERS2Q96G23 380 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 RHOXF2Q9BQY4 288 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 CCM2Q9BSQ5 444 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 TSPYL1Q9H0U9 437 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 INTS10Q9NVR2 710 aaKnown RBP13.7□□□□□ -0.22
SEC13-202ENST00000350697 U3KQA8 63 aa13.7□□□□□ -0.22
SEC13-202ENST00000350697 SPAARA0A1B0GVQ0 90 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 UBA6A0AVT1 1052 aaPredicted RBP13.69□□□□□ -0.22
SEC13-202ENST00000350697 A6NCN8 305 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 GIPC1O14908 333 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 S1PR4O95977 384 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 FTH1P02794 183 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 ERVK-10P10266 1014 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 F3P13726 295 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 ACP1P24666 158 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 SLC1A2P43004 574 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 MAGEA4P43358 317 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 ADARP55265 1226 aaKnown RBP13.69□□□□□ -0.22
SEC13-202ENST00000350697 SIM1P81133 766 aaPredicted RBP13.69□□□□□ -0.22
SEC13-202ENST00000350697 DNAJC3Q13217 504 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 CTBP1Q13363 440 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 NFE2L1Q14494 772 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 C14orf28Q4W4Y0 310 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 TEX35Q5T0J7 233 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 AGAP9Q5VTM2 703 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 IYDQ6PHW0 289 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 WASH2PQ6VEQ5 465 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 CEP128Q6ZU80 1094 aa13.69□□□□□ -0.22
SEC13-202ENST00000350697 MTERF4Q7Z6M4 381 aaKnown RBP13.69□□□□□ -0.22
SEC13-202ENST00000350697 C17orf82Q86X59 251 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms