RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ENTPD5O75356 428 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 SKAP2O75563 359 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 KRT34O76011 436 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 TRIM16O95361 564 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 NFATC1O95644 943 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 ESRRBO95718 433 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 LMNAP02545 664 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 ENO3P13929 434 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 MAGEA10P43363 369 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 SLC6A11P48066 632 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 ACADVLP49748 655 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 AGTR2P50052 363 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 FOXA1P55317 472 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PKNOX1P55347 436 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 ACTR3P61158 418 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 SEMG2Q02383 582 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 MESP2Q0VG99 397 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 CYLC2Q14093 348 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 KPNB1Q14974 876 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 EIF4HQ15056 248 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PDGFRLQ15198 375 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 ARSIQ5FYB1 569 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 XKR7Q5GH72 579 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 CDKL4Q5MAI5 379 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 HENMT1Q5T8I9 393 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 FAM219BQ5XKK7 198 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 TRIM68Q6AZZ1 485 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 NXNQ6DKJ4 435 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 CLEC6AQ6EIG7 209 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 OGFOD2Q6N063 350 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 TTC23LQ6PF05 361 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 RNF165Q6ZSG1 346 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 EFL1Q7Z2Z2 1120 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 HSD11B1LQ7Z5J1 315 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 SYVN1Q86TM6 617 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 MYO1HQ8N1T3 1032 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 TRAM1L1Q8N609 369 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 CLDN19Q8N6F1 224 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PAF1Q8N7H5 531 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 OR56A4Q8NGH8 313 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 MAFAQ8NHW3 353 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 TWIST2Q8WVJ9 160 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 DLG3Q92796 817 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 NXPE3Q969Y0 559 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 C19orf60Q96EN9 201 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 CLPTM1LQ96KA5 538 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PPP1R36Q96LQ0 422 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 C3orf30Q96M34 536 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PANX3Q96QZ0 392 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 COPS8Q99627 209 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PBX4Q9BYU1 374 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 FAM83DQ9H4H8 585 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 MTG2Q9H4K7 406 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 DCLRE1BQ9H816 532 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 EBF2Q9HAK2 575 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 RDH14Q9HBH5 336 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 SARS2Q9NP81 518 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PCDH12Q9NPG4 1184 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 HPS4Q9NQG7 708 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 KCTD5Q9NXV2 234 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 UTP6Q9NYH9 597 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 IL36AQ9UHA7 158 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 PRPF19Q9UMS4 504 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 ASB1Q9Y576 335 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 TNPO3Q9Y5L0 923 aaKnown RBP6.82□□□□□ -1.32
TRIM55-203ENST00000350034 SCN8AQ9UQD0 1980 aa6.82□□□□□ -1.32
TRIM55-203ENST00000350034 MAST4O15021 2626 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TRANK1O15050 2925 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 C16orf96A6NNT2 1141 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PSMD11O00231 422 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PIP5K1BO14986 540 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 RAD51BO15315 384 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 TAPBPO15533 448 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 FFAR2O15552 330 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SPINT1O43278 529 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 NUAK1O60285 661 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 SNX2O60749 519 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 GPC4O75487 556 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CIB2O75838 187 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 AP2A2O94973 939 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PSMG1O95456 288 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 ALDOCP09972 364 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MPC1LP0DKB6 136 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 UROSP10746 265 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 LBPP18428 481 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 ITGB6P18564 788 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 GPX3P22352 226 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 NFKBIAP25963 317 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 AOAHP28039 575 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PRDX3P30048 256 aaKnown RBP6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CCR7P32248 378 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MMP12P39900 470 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 PSMD8P48556 350 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MTTPP55157 894 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 ERVPABLB-1P60509 514 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 MXRA7P84157 204 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CDKL1Q00532 357 aa6.81□□□□□ -1.32
TRIM55-203ENST00000350034 CREB5Q02930 508 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms