RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RNF34Q969K3 372 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 TP53INP1Q96A56 240 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 TRMOQ9BU70 441 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 EMILIN2Q9BXX0 1053 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 LRRC14BA6NHZ5 514 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 SYCE1LA8MT33 242 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 MGEA5O60502 916 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 CASP3P42574 277 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 MAP2K4P45985 399 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 CRYBB1P53674 252 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-202ENST00000348987 SCAMP5Q8TAC9 235 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 RORBQ92753 470 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 PGAP3Q96FM1 320 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-202ENST00000348987 SLIRPQ9GZT3 109 aaKnown RBP18.45■□□□□ 0.54
SCARF1-202ENST00000348987 TUBB1Q9H4B7 451 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 DKK3Q9UBP4 350 aa18.45■□□□□ 0.54
SCARF1-202ENST00000348987 DNAJB5O75953 348 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 CDK14O94921 469 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 SIX3O95343 332 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-202ENST00000348987 NTRK1P04629 796 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 AIF1P55008 147 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 PHC1P78364 1004 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 SPATS1Q496A3 300 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 RSBN1Q5VWQ0 802 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-202ENST00000348987 STEAP3Q658P3 488 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 P2RY8Q86VZ1 359 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 HOMEZQ8IX15 550 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 YME1L1Q96TA2 773 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 OSBPL10Q9BXB5 764 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 ASPSCR1Q9BZE9 553 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 NUDT5Q9UKK9 219 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 NEU3Q9UQ49 428 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 M0QX08 132 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 HOXC11O43248 304 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-202ENST00000348987 PRSS23O95084 383 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 LBPP18428 481 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 CHRNA4P43681 627 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 KCNK10P57789 538 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 ISL1P61371 349 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 LAPTM5Q13571 262 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 FAM110CQ1W6H9 321 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 NOMO2Q5JPE7 1267 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 DESI1Q6ICB0 168 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 DENND5AQ6IQ26 1287 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 TMC5Q6UXY8 1006 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 LACC1Q8IV20 430 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 CNIH3Q8TBE1 160 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 GTF3C2Q8WUA4 911 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-202ENST00000348987 RTP3Q9BQQ7 232 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 ITM2CQ9NQX7 267 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 POLG2Q9UHN1 485 aa18.44■□□□□ 0.54
SCARF1-202ENST00000348987 RAD51BO15315 384 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 IDH3BO43837 385 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 EEFSECP57772 596 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 FSCN1Q16658 493 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 TIGD5Q53EQ6 642 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 GPR158Q5T848 1215 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 PM20D1Q6GTS8 502 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 CCDC81Q6ZN84 652 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 BEND5Q7L4P6 421 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 PROSER1Q86XN7 944 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 SLC22A15Q8IZD6 547 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 ABI1Q8IZP0 508 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 HASPINQ8TF76 798 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 RPL3LQ92901 407 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 PARK7Q99497 189 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 TMLHEQ9NVH6 421 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 IL37Q9NZH6 218 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 NAALAD2Q9Y3Q0 740 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 TTC3P53804 2025 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 MYADML2A6NDP7 307 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 MTSS1O43312 755 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 PMPCBO75439 489 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 C1RP00736 705 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 HTR1EP28566 365 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 SCNN1GP51170 649 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 COQ5Q5HYK3 327 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 SULT1C3Q6IMI6 304 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 DCP2Q8IU60 420 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 ARHGAP12Q8IWW6 846 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 PPHLN1Q8NEY8 458 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 ATL1Q8WXF7 558 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 MYLPFQ96A32 169 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 ITCHQ96J02 903 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 NSUN5Q96P11 429 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 ZNF300Q96RE9 604 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 TMEM209Q96SK2 561 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 CDK5RAP1Q96SZ6 601 aaKnown RBP18.43■□□□□ 0.54
SCARF1-202ENST00000348987 TBL1YQ9BQ87 522 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 ERVK-18Q9QC07 812 aa18.43■□□□□ 0.54
SCARF1-202ENST00000348987 HAS3O00219 553 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 AZIN1O14977 448 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 CCNKO75909 580 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 CTSHP09668 335 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 TXNDC11Q6PKC3 985 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 TMEM207Q6UWW9 146 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 FAM86B1Q8N7N1 296 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 FAM83FQ8NEG4 500 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-202ENST00000348987 ITFG1Q8TB96 612 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 SH3RF2Q8TEC5 729 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms