RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 EDN1P05305 212 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 ALOX15P16050 662 aaPredicted RBP14.58□□□□□ -0.08
NUP50-201ENST00000347635 CRATP43155 626 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 MTPNP58546 118 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 ERVK-8P63133 956 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 IL10RBQ08334 325 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 TRIM74Q86UV6 250 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 TRIM73Q86UV7 250 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 MCFD2Q8NI22 146 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 ZUFSPQ96AP4 578 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 ABHD8Q96I13 439 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 SPATA17Q96L03 361 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 ABCA3Q99758 1704 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 NRP1O14786 923 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 LRATO95237 230 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 UGT1A6P19224 532 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 UGT1A1P22309 533 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 UGT1A4P22310 534 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 UGT1A3P35503 534 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 UGT1A5P35504 534 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 YAP1P46937 504 aaKnown RBP14.58□□□□□ -0.08
NUP50-201ENST00000347635 GTF2H2Q13888 395 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 SIM2Q14190 667 aaPredicted RBP14.58□□□□□ -0.08
NUP50-201ENST00000347635 PDZK1Q5T2W1 519 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 GTF2H2CQ6P1K8 395 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 SIDT2Q8NBJ9 832 aaKnown RBP14.58□□□□□ -0.08
NUP50-201ENST00000347635 TRIB2Q92519 343 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 TMEM159Q96B96 161 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 RBM47A0AV96 593 aaKnown RBP14.58□□□□□ -0.08
NUP50-201ENST00000347635 H0YJX3 145 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 RGS10O43665 173 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 SLC35E2BP0CK96 405 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 CTPS1P17812 591 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 IRF8Q02556 426 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 DAG1Q14118 895 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 PPP1R3AQ16821 1122 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 RBM48Q5RL73 367 aaKnown RBP14.58□□□□□ -0.08
NUP50-201ENST00000347635 FAM46CQ5VWP2 391 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 FAM151BQ6UXP7 276 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 TRPV3Q8NET8 790 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 PLD4Q96BZ4 506 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 REPS1Q96D71 796 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 TMEM165Q9HC07 324 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 CRNNQ9UBG3 495 aaPredicted RBP14.58□□□□□ -0.08
NUP50-201ENST00000347635 DNAJB9Q9UBS3 223 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 PCDHB1Q9Y5F3 818 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 G3V2L1 256 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 DCLK1O15075 740 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 ATP6V1G1O75348 118 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 CNMDO75829 334 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 CAPN1P07384 714 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 PTPN2P17706 415 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 SLC26A3P40879 764 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 TJAP1Q5JTD0 557 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 SERINC5Q86VE9 423 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 DEPDC4Q8N2C3 294 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 TMEM130Q8N3G9 435 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 C19orf18Q8NEA5 215 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 ARHGAP39Q9C0H5 1083 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 GMEB1Q9Y692 573 aa14.58□□□□□ -0.08
NUP50-201ENST00000347635 FAM72CH0Y354 149 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 QSOX1O00391 747 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 ZNF865P0CJ78 1059 aaPredicted RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 HSPA14Q0VDF9 509 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 BNIP3Q12983 259 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 FAM72AQ5TYM5 149 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 FAM72DQ6L9T8 149 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 PIM3Q86V86 326 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 FAM72BQ86X60 149 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 OR10A6Q8NH74 314 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 ZFP28Q8NHY6 868 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 MZB1Q8WU39 189 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 ISOC1Q96CN7 298 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 MEAF6Q9HAF1 191 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 PGAP2Q9UHJ9 254 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 IGKV6-21A0A0C4DH24 114 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 CCDC162PA2VCL2 907 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 NOBOXO60393 691 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 NDUFS2O75306 463 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 SH3BGRLO75368 114 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 NTRK1P04629 796 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 RPN2P04844 631 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 CXCR3P49682 368 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 ATAT1Q5SQI0 421 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 FBXL19Q6PCT2 694 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 P2RY8Q86VZ1 359 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 SCAMP5Q8TAC9 235 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 GPATCH1Q9BRR8 931 aaKnown RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 BTBD3Q9Y2F9 522 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 THSD7AQ9UPZ6 1657 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 PRMT5O14744 637 aaPredicted RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 GSK3BP49841 420 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 TRIM32Q13049 653 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 CAMK2GQ13555 558 aaPredicted RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 PWP1Q13610 501 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 SPATS1Q496A3 300 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 FGD3Q5JSP0 725 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 AKAP14Q86UN6 197 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 IFNLR1Q8IU57 520 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms