RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 RDH11Q8TC12 318 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 FAM45AQ8TCE6 357 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 SAP25Q8TEE9 199 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 SREK1Q8WXA9 508 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 SLC6A18Q96N87 628 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 CPEB1Q9BZB8 566 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 EBF2Q9HAK2 575 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 SLCO1B3Q9NPD5 702 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 SCML1Q9UN30 329 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 VPS9D1Q9Y2B5 631 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 ARL2BPQ9Y2Y0 163 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 A0A0J9YYE9 177 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 OR51F1A6NGY5 319 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 PFDN6O15212 129 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 STX7O15400 261 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 YKT6O15498 198 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF821O75541 412 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 KIAA0754O94854 1291 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 PIGNO95427 931 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 S1PR4O95977 384 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 TRBC1P01850 177 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 ASLP04424 464 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 SLC35E2BP0CK96 405 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 POLR2EP19388 210 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 STC1P52823 247 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 IRF9Q00978 393 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 TARDBPQ13148 414 aaKnown RBP eCLIP13.35□□□□□ -0.272e-7■■■□□ 14.9
HERPUD1-202ENST00000344114 PCLAFQ15004 111 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 DLG2Q15700 870 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 FASTKD1Q53R41 847 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 RNF187Q5TA31 235 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 HES3Q5TGS1 186 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 MBLAC2Q68D91 279 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 CNSTQ6PJW8 725 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 OTOAQ7RTW8 1153 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 ACVR1CQ8NER5 493 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF398Q8TD17 642 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 PIH1D2Q8WWB5 315 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 RPL10LQ96L21 214 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 C7orf26Q96N11 449 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 TCF12Q99081 682 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 MECRQ9BV79 373 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 RSPH9Q9H1X1 276 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 TMEM216Q9P0N5 145 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 MARCH4Q9P2E8 410 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 KLHL14Q9P2G3 628 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 COPG2Q9UBF2 871 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 SUN2Q9UH99 717 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 ACOT9Q9Y305 439 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
HERPUD1-202ENST00000344114 A0A1W2PR77 199 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 CAPN8A6NHC0 703 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 CCL22O00626 93 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 AURKAO14965 403 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 PHGDHO43175 533 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 BUD23O43709 281 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 H2AFYO75367 372 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 TGDSO95455 350 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 ATP5BP06576 529 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 SLC8A1P32418 973 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 TAS2R39P59534 338 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 CHI3L2Q15782 390 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 CARD16Q5EG05 197 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 AARS2Q5JTZ9 985 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 RBM20Q5T481 1227 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 HECTD2Q5U5R9 776 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 C16orf46Q6P387 395 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 CAMK1DQ8IU85 385 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 PLD6Q8N2A8 252 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 RYBPQ8N488 228 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 PAF1Q8N7H5 531 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 OR6K2Q8NGY2 324 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 SKA1Q96BD8 255 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 LYSMD1Q96S90 227 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 OMDQ99983 421 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 GPR63Q9BZJ6 419 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 TNKS2Q9H2K2 1166 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 NMRAL1Q9HBL8 299 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 POPDC3Q9HBV1 291 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 ERVW-1Q9UQF0 538 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 NCKAP1Q9Y2A7 1128 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 PKP3Q9Y446 797 aa13.34□□□□□ -0.27
HERPUD1-202ENST00000344114 KLHL2O95198 593 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 POP4O95707 220 aaKnown RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 SLC4A1P02730 911 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 SRPRAP08240 638 aaKnown RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 SAT1P21673 171 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 CD38P28907 300 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 EPHA8P29322 1005 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 ALDH3A1P30838 453 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 HMGCLP35914 325 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 NNMTP40261 264 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 SLC26A3P40879 764 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 ABL2P42684 1182 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms