RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TIMM13Q9Y5L4 95 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-203ENST00000343508 FABP12A6NFH5 140 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 BOLA2-SMG1P6H3BVE0 249 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 AP1G1O43747 822 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PRPS2P11908 318 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 NOS3P29474 1203 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ACSM2AQ08AH3 577 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 SLC35G1Q2M3R5 365 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 ACSM2BQ68CK6 577 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 RETSATQ6NUM9 610 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 PPTC7Q8NI37 304 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 FIZ1Q96SL8 496 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 IRF2BPLQ9H1B7 796 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 KANSL3Q9P2N6 904 aa4.74□□□□□ -1.65
CSMD3-203ENST00000343508 CENPBD1B2RD01 187 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GRIA1P42261 906 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ARSFP54793 590 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 KLHL22Q53GT1 634 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 C2orf69Q8N8R5 385 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 DIRAS2Q96HU8 199 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PYURFQ96I23 114 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FAM92AA1XBS5 289 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 HTR3EA5X5Y0 456 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TNFRSF11BO00300 401 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FPGTO14772 594 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 KPNA6O60684 536 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ERN1O75460 977 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RPL9P32969 192 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GALNT3Q14435 633 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PAFAH1B3Q15102 231 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM198Q66K66 360 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ATL1Q8WXF7 558 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 BTN2A3PQ96KV6 586 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SENP8Q96LD8 212 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SLC30A2Q9BRI3 323 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CEPT1Q9Y6K0 416 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 LRP5O75197 1615 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 K7EPI3 171 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RNASEH2AO75792 299 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MC4RP32245 332 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ALDH9A1P49189 494 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TXNL4AP83876 142 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PMS2P3Q13401 168 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PITRM1Q5JRX3 1037 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 C16orf62Q7Z3J2 963 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RTP4Q96DX8 246 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FBXL20Q96IG2 436 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RACGAP1Q9H0H5 632 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 AASSQ9UDR5 926 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF232Q9UNY5 417 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SLC12A8A0AV02 714 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ACOX3O15254 700 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 OR10H3O60404 316 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 UGT2B17O75795 530 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 C9P02748 559 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RPN2P04844 631 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 S100A9P06702 114 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CD72P21854 359 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 AP3S2P59780 193 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SLC39A4Q6P5W5 647 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM135Q86UB9 458 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TRPV1Q8NER1 839 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RFKQ969G6 155 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 HTATIP2Q9BUP3 242 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 UBE2QL1A1L167 161 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GABRDO14764 452 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ORC5O43913 435 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CD40LGP29965 261 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 RFC2P35250 354 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 YAP1P46937 504 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GMPSP49915 693 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 WNT3AP56704 352 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PITPNAQ00169 270 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF678Q5SXM1 525 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 DNAJB7Q7Z6W7 309 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CCDC28AQ8IWP9 274 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GALNT12Q8IXK2 581 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GJD3Q8N144 294 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PYROXD2Q8N2H3 581 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 DNAJB3Q8WWF6 145 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CRYGNQ8WXF5 182 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CLEC4DQ8WXI8 215 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 UBE2E3Q969T4 207 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 GRIP1Q9Y3R0 1128 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 NPEPPSL1A6NEC2 478 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PAPSS2O95340 614 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TSTD2Q5T7W7 516 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 OR2T5Q6IEZ7 315 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 SULT1C3Q6IMI6 304 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CYP20A1Q6UW02 462 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CDHR3Q6ZTQ4 885 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 CXXC5Q7LFL8 322 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 FAM35AQ86V20 835 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 OR2T29Q8NH02 315 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 MICAL3Q7RTP6 2002 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 J3QRK9 145 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 PKMP14618 531 aaKnown RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 ATF4P18848 351 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-203ENST00000343508 TSC22D1Q15714 1073 aa4.73□□□□□ -1.65
CSMD3-203ENST00000343508 KIAA1614Q5VZ46 1190 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms